; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018797 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018797
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhloem filament protein
Genome locationChr04:8696619..8697074
RNA-Seq ExpressionHG10018797
SyntenyHG10018797
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34264.1 phloem filament protein [Cucumis melo subsp. melo]2.0e-1033.33Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        + IGG  G+G  LPG ++ + G  GIG   G           G   +  +  + +++        +++  DV + AKFAVD FN+ Y+NNL+++Y+  A 
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        + E++ +  +YS++L   DC  RLL++ A+V+EKT D  K   L SF+ I
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

KAG6588835.1 hypothetical protein SDJN03_17400, partial [Cucurbita argyrosperma subsp. sororia]7.8e-0742.17Show/hide
Query:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK
        +L+ + V +++KFAV +FN  YK+ L +  IY     E+  D +K+ LKL  +DCL+R+  YEA+V  K   G K L LESF+
Subjt:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK

TYK06876.1 phloem filament protein [Cucumis melo var. makuwa]4.0e-1136Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        + IGGG G+G++LPG  L +S   GIGI                 G G  S  P  +  PEE         V K A++AV KFN+D+ N+LK++Y++   
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        I ++D  T +Y+++L   DCL R L ++ +V+EK       LT  SF+PI
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

XP_022927699.1 uncharacterized protein LOC111434517 [Cucurbita moschata]1.7e-0642.17Show/hide
Query:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK
        +L+   V +++KFAV +FN  YK+ L +  IY     E+  D +K+ LKL  +DCL+R+  YEA+V  K   G K L LESF+
Subjt:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK

XP_038887120.1 uncharacterized protein LOC120077305 [Benincasa hispida]8.1e-1237.09Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        M+IGG  GVG+ LPG                 IGI G I I G  G GS  +       P+ +    +   +Q++ KFAV++FN  Y +NLK++ +Y   
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPIN
           LD     Y+L L  +DCL+RLL ++A V E   DG   LTLESF P++
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPIN

TrEMBL top hitse value%identityAlignment
A0A5A7SQL4 Phloem filament protein9.6e-1133.33Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        + IGG  G+G  LPG ++ + G  GIG   G           G   +  +  + +++        +++  DV + AKFAVD FN+ Y+NNL+++Y+  A 
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        + E++ +  +YS++L   DC  RLL++ A+V+EKT D  K   L SF+ I
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

A0A5D3C980 Phloem filament protein1.9e-1136Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        + IGGG G+G++LPG  L +S   GIGI                 G G  S  P  +  PEE         V K A++AV KFN+D+ N+LK++Y++   
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        I ++D  T +Y+++L   DCL R L ++ +V+EK       LT  SF+PI
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

A0A6J1EIQ8 uncharacterized protein LOC1114345178.5e-0742.17Show/hide
Query:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK
        +L+   V +++KFAV +FN  YK+ L +  IY     E+  D +K+ LKL  +DCL+R+  YEA+V  K   G K L LESF+
Subjt:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFK

A0A6J1EQ39 uncharacterized protein LOC111434636 isoform X27.2e-0642.35Show/hide
Query:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        +L+ S VQ+V+KFA+D FN    ++LKY  IY     E+  D IK+ + L   DCL R+  YEA V  K   G +   +ESFK I
Subjt:  DLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

E5GCR6 Phloem filament protein9.6e-1133.33Show/hide
Query:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL
        + IGG  G+G  LPG ++ + G  GIG   G           G   +  +  + +++        +++  DV + AKFAVD FN+ Y+NNL+++Y+  A 
Subjt:  MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGAL

Query:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI
        + E++ +  +YS++L   DC  RLL++ A+V+EKT D  K   L SF+ I
Subjt:  IEELDGDTIKYSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTGGTGGAGGTTTCGGTGTTGGCATTCAACTTCCCGGTACCGATTTGGGTGTATCGGGTAGCGCTGGCATCGGTATCGATGGCGGTAGCATCGGCATCACCGG
TGCCATCGATATCGATGGTAGCGGTGGAAACGGCAGTAACAGTAGCTACCCCAAAATTTATGCTGGGCCTGAGGAATTGGCTTCTGATCTGGAAATTTCGGATGTTCAAA
AAGTTGCAAAGTTTGCAGTGGATAAGTTCAACGAGGACTATAAAAATAATCTCAAGTACAAGTACATTTATGGAGCTTTGATTGAGGAGCTGGATGGAGACACCATAAAG
TACAGTCTCAAGTTAGCAGTAGTAGACTGTTTGGAACGTTTGCTCAAGTATGAGGCTATTGTGCTTGAAAAAACAGAAGACGGTGTCAAGTATTTGACACTTGAATCTTT
CAAGCCAATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATTGGTGGAGGTTTCGGTGTTGGCATTCAACTTCCCGGTACCGATTTGGGTGTATCGGGTAGCGCTGGCATCGGTATCGATGGCGGTAGCATCGGCATCACCGG
TGCCATCGATATCGATGGTAGCGGTGGAAACGGCAGTAACAGTAGCTACCCCAAAATTTATGCTGGGCCTGAGGAATTGGCTTCTGATCTGGAAATTTCGGATGTTCAAA
AAGTTGCAAAGTTTGCAGTGGATAAGTTCAACGAGGACTATAAAAATAATCTCAAGTACAAGTACATTTATGGAGCTTTGATTGAGGAGCTGGATGGAGACACCATAAAG
TACAGTCTCAAGTTAGCAGTAGTAGACTGTTTGGAACGTTTGCTCAAGTATGAGGCTATTGTGCTTGAAAAAACAGAAGACGGTGTCAAGTATTTGACACTTGAATCTTT
CAAGCCAATTAACTAA
Protein sequenceShow/hide protein sequence
MSIGGGFGVGIQLPGTDLGVSGSAGIGIDGGSIGITGAIDIDGSGGNGSNSSYPKIYAGPEELASDLEISDVQKVAKFAVDKFNEDYKNNLKYKYIYGALIEELDGDTIK
YSLKLAVVDCLERLLKYEAIVLEKTEDGVKYLTLESFKPIN