; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018800 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018800
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhloem filament protein
Genome locationChr04:8784386..8784904
RNA-Seq ExpressionHG10018800
SyntenyHG10018800
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34264.1 phloem filament protein [Cucumis melo subsp. melo]1.0e-1040.41Show/hide
Query:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL
        LG+ G  GIG G  G  I++GGGIGIGG     +S+NP+ +     N +               +P+V EAA+FAV  FN+ Y+NNL+++YV EAW+  +
Subjt:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL

Query:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI
        + +   Y ++LVA+DC  RLL F  VV+EK     K + L  FE+I
Subjt:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI

TYK06876.1 phloem filament protein [Cucumis melo var. makuwa]2.1e-1141.5Show/hide
Query:  LGLSGSAGIGIGGAGINL--GGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD
        LG+ G  GIG+   G+N+  GGGIGIGGG         S+D  G   EEV+                 +AA++AV KFN+D+ N+LK++YVF+  I  +D
Subjt:  LGLSGSAGIGIGGAGINL--GGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD

Query:  VDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQIKY
        V T  Y ++LVA+DCL R L F  VV+EK  G     T   FE I Y
Subjt:  VDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQIKY

XP_011658840.2 uncharacterized protein LOC105436098 [Cucumis sativus]2.9e-0535.88Show/hide
Query:  LGLSGSAGIGIG--GAGINLGGGIGIG---GGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIE
        +G+ G  GIGIG  G  +++GGGIGIG   GG   +S++P+ +               + VP       +   A FAV+ FN+ Y N L +  V EAW+ 
Subjt:  LGLSGSAGIGIG--GAGINLGGGIGIG---GGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIE

Query:  PLDVDTNRYLLKLVAQDCLERLLTFLVVVLE
         L      Y ++LVA+DCL R L F  +V+E
Subjt:  PLDVDTNRYLLKLVAQDCLERLLTFLVVVLE

XP_038887119.1 uncharacterized protein LOC120077304 [Benincasa hispida]1.9e-0441.38Show/hide
Query:  TDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLDVDTNRYLLKLVAQDCLERLLTFLVVVLE--KREGEVKYFTLEYFEQ
        TD  +P V++ A+FA+ +FN  +  +L+YK V E W + LD    RY L + A DCL RLL F  +V       GE     LE FEQ
Subjt:  TDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLDVDTNRYLLKLVAQDCLERLLTFLVVVLE--KREGEVKYFTLEYFEQ

XP_038887120.1 uncharacterized protein LOC120077305 [Benincasa hispida]3.1e-0736.17Show/hide
Query:  LSGSAGIGIGGAGINLGGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLDVDTN
        + GS G+G+   GI +GGGI IGGG               G G     +P   VP     P++QE  +FAV +FN  Y +NLK++ V++     LD    
Subjt:  LSGSAGIGIGGAGINLGGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLDVDTN

Query:  RYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI
         Y L L A DCL+RLL F   V E +       TLE F+ +
Subjt:  RYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI

TrEMBL top hitse value%identityAlignment
A0A0A0K477 PP1 domain-containing protein2.6e-0434.51Show/hide
Query:  AGFNLGFGLGGLGLGLSGSAGIGIGGAGINLGGGIGIG---GGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNL
        A   +  G+GG G+G+    GIG+ G  +++GGGIGIG   GG   +S++P+ +               + VP       +   A FAV+ FN+ Y N L
Subjt:  AGFNLGFGLGGLGLGLSGSAGIGIGGAGINLGGGIGIG---GGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNL

Query:  KYKYVFEAWIEPLDVDTNRYLLKLVAQDCLERLLTFLVVVLE
         +  V EAW+  L      Y ++LVA+DCL R L F  +V+E
Subjt:  KYKYVFEAWIEPLDVDTNRYLLKLVAQDCLERLLTFLVVVLE

A0A5A7SJV3 Phloem filament protein3.4e-0437.5Show/hide
Query:  LGLGLSGSAGIGIGGAGINLGGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD
        LG+G   S G+GI G  I++GGGIGI G    R     S D      E   V+           P + E A+FAV  FN+ + NNL+++ V EAW+    
Subjt:  LGLGLSGSAGIGIGGAGINLGGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD

Query:  VDTNRYLLKLVAQDCLERLLTFLVVVLE
             Y ++LVA+DCL R L +  VV+E
Subjt:  VDTNRYLLKLVAQDCLERLLTFLVVVLE

A0A5A7SQL4 Phloem filament protein4.9e-1140.41Show/hide
Query:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL
        LG+ G  GIG G  G  I++GGGIGIGG     +S+NP+ +     N +               +P+V EAA+FAV  FN+ Y+NNL+++YV EAW+  +
Subjt:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL

Query:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI
        + +   Y ++LVA+DC  RLL F  VV+EK     K + L  FE+I
Subjt:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI

A0A5D3C980 Phloem filament protein9.9e-1241.5Show/hide
Query:  LGLSGSAGIGIGGAGINL--GGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD
        LG+ G  GIG+   G+N+  GGGIGIGGG         S+D  G   EEV+                 +AA++AV KFN+D+ N+LK++YVF+  I  +D
Subjt:  LGLSGSAGIGIGGAGINL--GGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPLD

Query:  VDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQIKY
        V T  Y ++LVA+DCL R L F  VV+EK  G     T   FE I Y
Subjt:  VDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQIKY

E5GCR6 Phloem filament protein4.9e-1140.41Show/hide
Query:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL
        LG+ G  GIG G  G  I++GGGIGIGG     +S+NP+ +     N +               +P+V EAA+FAV  FN+ Y+NNL+++YV EAW+  +
Subjt:  LGLSGSAGIGIG--GAGINLGGGIGIGGGLRR-RSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAWIEPL

Query:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI
        + +   Y ++LVA+DC  RLL F  VV+EK     K + L  FE+I
Subjt:  DVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTGGTGCAGGTTTTAATCTTGGCTTTGGTCTTGGCGGTCTTGGTTTAGGTTTATCAGGCAGTGCTGGCATCGGTATTGGCGGCGCTGGCATCAATCTCGGTGG
TGGCATAGGTATTGGTGGTGGTCTCCGTAGACGCAGTTATAACCCAAACAGCGAAGATGACGACGGCGGTAATGGCGAAGAGGTTGTCGTTGATCCTTCCACATTGGTTC
CAACTGATCCAGGCAGCCCTAATGTTCAAGAAGCTGCACAGTTTGCAGTGAGTAAGTTCAACGAGGACTATAAAAATAATCTCAAGTACAAGTACGTTTTTGAAGCTTGG
ATTGAACCGCTGGATGTAGACACTAACAGGTATCTTCTCAAGTTAGTAGCACAAGACTGTTTGGAACGTTTGCTCACCTTTCTGGTTGTTGTGCTTGAAAAAAGAGAAGG
CGAGGTCAAGTATTTCACACTTGAATATTTCGAGCAAATCAAGTATTTGGCAATTGAACCTTTGAAGCCAATTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTGGTGCAGGTTTTAATCTTGGCTTTGGTCTTGGCGGTCTTGGTTTAGGTTTATCAGGCAGTGCTGGCATCGGTATTGGCGGCGCTGGCATCAATCTCGGTGG
TGGCATAGGTATTGGTGGTGGTCTCCGTAGACGCAGTTATAACCCAAACAGCGAAGATGACGACGGCGGTAATGGCGAAGAGGTTGTCGTTGATCCTTCCACATTGGTTC
CAACTGATCCAGGCAGCCCTAATGTTCAAGAAGCTGCACAGTTTGCAGTGAGTAAGTTCAACGAGGACTATAAAAATAATCTCAAGTACAAGTACGTTTTTGAAGCTTGG
ATTGAACCGCTGGATGTAGACACTAACAGGTATCTTCTCAAGTTAGTAGCACAAGACTGTTTGGAACGTTTGCTCACCTTTCTGGTTGTTGTGCTTGAAAAAAGAGAAGG
CGAGGTCAAGTATTTCACACTTGAATATTTCGAGCAAATCAAGTATTTGGCAATTGAACCTTTGAAGCCAATTAACTAA
Protein sequenceShow/hide protein sequence
MTLGAGFNLGFGLGGLGLGLSGSAGIGIGGAGINLGGGIGIGGGLRRRSYNPNSEDDDGGNGEEVVVDPSTLVPTDPGSPNVQEAAQFAVSKFNEDYKNNLKYKYVFEAW
IEPLDVDTNRYLLKLVAQDCLERLLTFLVVVLEKREGEVKYFTLEYFEQIKYLAIEPLKPIN