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HG10018802 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018802
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPhloem filament protein
Genome locationChr04:8860554..8860862
RNA-Seq ExpressionHG10018802
SyntenyHG10018802
Gene Ontology termsGO:0004869 - cysteine-type endopeptidase inhibitor activity (molecular function)
InterPro domainsIPR009994 - Phloem filament PP1
IPR027214 - Cystatin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAC12676.1 phloem filament protein [Cucurbita maxima]3.1e-1543.56Show/hide
Query:  MSYVPCIC-----PKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI
        MS+   +C      ++WIKIPD    CV+++ + AVE+FN QH  SLKY S+ EGWY EL +NN++YRLH++  D L+R+L + A+VF +  + + I K+
Subjt:  MSYVPCIC-----PKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI

Query:  L
        +
Subjt:  L

ADN34265.1 phloem filament protein [Cucumis melo subsp. melo]4.6e-1949.52Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +P  C K+WIK+P    PC++ I    VEEF  +++ SL Y +V+EGWY+ELD+  N +RYRLH+Q  DCL+R LKF AI+  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

KAG6588840.1 hypothetical protein SDJN03_17405, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1545.56Show/hide
Query:  KRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKILESF
        ++WIKIPD  + CV+++ + AVE+FN QH  SLKY S+ EGW+ EL +NN++YRLH++  D L+R+L + A+VF +  + + I K++  F
Subjt:  KRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKILESF

TYK06877.1 phloem filament protein [Cucumis melo var. makuwa]8.7e-1849.52Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELD--ENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +   C K+WIK+P    PC++ I    VEEF  +++ SL Y +V+EGWY+ELD   N VRYRLH+Q  DCL+R LKF AI+  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELD--ENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

XP_038887119.1 uncharacterized protein LOC120077304 [Benincasa hispida]1.9e-2863.73Show/hide
Query:  SYVPCICPKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKILESFEQ
        S  PC C K+WIKI D  TPCVED  +FA+EEFN +HNGSL+Y  VIEGW KELDE+++RYRL +Q  DCL+R L+F AIVF  ++EN E T+ILESFEQ
Subjt:  SYVPCICPKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKILESFEQ

Query:  LF
         F
Subjt:  LF

TrEMBL top hitse value%identityAlignment
A0A0A0K471 Phloem filament protein4.8e-2252.38Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +P IC KRWIK P+   PC++ I    +EEF  +H  SL Y +V+EGWYKELD+  N +RYRLH+Q  DC++R LKF A++  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SFEQ+
Subjt:  SFEQL

A0A5A7SN25 Phloem filament protein2.2e-1949.52Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +P  C K+WIK+P    PC++ I    VEEF  +++ SL Y +V+EGWY+ELD+  N +RYRLH+Q  DCL+R LKF AI+  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

A0A5D3C4U6 Phloem filament protein4.2e-1849.52Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELD--ENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +   C K+WIK+P    PC++ I    VEEF  +++ SL Y +V+EGWY+ELD   N VRYRLH+Q  DCL+R LKF AI+  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELD--ENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

E5GCR7 Phloem filament protein2.2e-1949.52Show/hide
Query:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE
        MS +P  C K+WIK+P    PC++ I    VEEF  +++ SL Y +V+EGWY+ELD+  N +RYRLH+Q  DCL+R LKF AI+  QH +N+E + I LE
Subjt:  MSYVPCICPKRWIKIPDG-TPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDE--NNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI-LE

Query:  SFEQL
        SF+++
Subjt:  SFEQL

P94012 Phloem filament protein1.5e-1543.56Show/hide
Query:  MSYVPCIC-----PKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI
        MS+   +C      ++WIKIPD    CV+++ + AVE+FN QH  SLKY S+ EGWY EL +NN++YRLH++  D L+R+L + A+VF +  + + I K+
Subjt:  MSYVPCIC-----PKRWIKIPD-GTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKI

Query:  L
        +
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATGTGCCATGCATTTGTCCCAAAAGGTGGATTAAAATCCCTGATGGGACTCCTTGTGTTGAAGACATTGGAAGGTTTGCTGTAGAAGAGTTCAACAATCAACA
CAATGGGAGCTTGAAATACATAAGTGTCATTGAAGGTTGGTATAAGGAGTTGGATGAAAACAACGTAAGGTACCGTCTCCATCTTCAAGTGAAAGACTGTCTTAAACGTA
ATCTCAAATTTTTGGCTATTGTGTTCACACAACATACTGAAAATGATGAGATTACTAAGATTCTTGAATCTTTTGAGCAGCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATGTGCCATGCATTTGTCCCAAAAGGTGGATTAAAATCCCTGATGGGACTCCTTGTGTTGAAGACATTGGAAGGTTTGCTGTAGAAGAGTTCAACAATCAACA
CAATGGGAGCTTGAAATACATAAGTGTCATTGAAGGTTGGTATAAGGAGTTGGATGAAAACAACGTAAGGTACCGTCTCCATCTTCAAGTGAAAGACTGTCTTAAACGTA
ATCTCAAATTTTTGGCTATTGTGTTCACACAACATACTGAAAATGATGAGATTACTAAGATTCTTGAATCTTTTGAGCAGCTTTTCTAA
Protein sequenceShow/hide protein sequence
MSYVPCICPKRWIKIPDGTPCVEDIGRFAVEEFNNQHNGSLKYISVIEGWYKELDENNVRYRLHLQVKDCLKRNLKFLAIVFTQHTENDEITKILESFEQLF