; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018856 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018856
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr04:9751544..9752425
RNA-Seq ExpressionHG10018856
SyntenyHG10018856
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038888933.1 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Benincasa hispida]1.3e-15493.86Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN+FELSDSDFAIRIDLMTKVFGIDAAERYFEGLP D+KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTALPFNEMMTLYMSVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        I+DDLKQRMVHPDIFTYNLWISSLA ALNIDGVRQILNEMN  PNSNEDWVRYI+LVNIYVKSAHLLHSG NS+VESESGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS CNRLVNAFVEAGLNEKAN+FVTLLIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

XP_038888934.1 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Benincasa hispida]1.3e-15493.86Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN+FELSDSDFAIRIDLMTKVFGIDAAERYFEGLP D+KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTALPFNEMMTLYMSVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        I+DDLKQRMVHPDIFTYNLWISSLA ALNIDGVRQILNEMN  PNSNEDWVRYI+LVNIYVKSAHLLHSG NS+VESESGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS CNRLVNAFVEAGLNEKAN+FVTLLIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

XP_038888935.1 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 [Benincasa hispida]1.3e-15493.86Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN+FELSDSDFAIRIDLMTKVFGIDAAERYFEGLP D+KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTALPFNEMMTLYMSVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        I+DDLKQRMVHPDIFTYNLWISSLA ALNIDGVRQILNEMN  PNSNEDWVRYI+LVNIYVKSAHLLHSG NS+VESESGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS CNRLVNAFVEAGLNEKAN+FVTLLIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

XP_038888936.1 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 [Benincasa hispida]1.3e-15493.86Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN+FELSDSDFAIRIDLMTKVFGIDAAERYFEGLP D+KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTALPFNEMMTLYMSVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        I+DDLKQRMVHPDIFTYNLWISSLA ALNIDGVRQILNEMN  PNSNEDWVRYI+LVNIYVKSAHLLHSG NS+VESESGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS CNRLVNAFVEAGLNEKAN+FVTLLIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

XP_038888937.1 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X5 [Benincasa hispida]1.3e-15493.86Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN+FELSDSDFAIRIDLMTKVFGIDAAERYFEGLP D+KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTALPFNEMMTLYMSVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        I+DDLKQRMVHPDIFTYNLWISSLA ALNIDGVRQILNEMN  PNSNEDWVRYI+LVNIYVKSAHLLHSG NS+VESESGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSL+MTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS CNRLVNAFVEAGLNEKAN+FVTLLIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

TrEMBL top hitse value%identityAlignment
A0A0A0K649 Uncharacterized protein4.1e-15191.81Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MV+HN  ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPIDAKTCETYTALLHSFAGSKLT+KAETLYEK+KES+IPLTALPFNEMMTLY S+GQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGV+QILNEMN NPNSNE+WVRYI LVNIYVKSA+LLHS SNSVVES SGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVIDQWKQSTTTDFD+S CNRLVNAF+EAGL+EKANSFV +LIQKNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

A0A1S3C072 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X22.4e-15191.47Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN  +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPIDAKTCETYTALLHSFAGSKLT+KAETLYEKIKES+IPLTALPFNEMMTLY S+GQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        IVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV+QILNEMN NPNSNE+WVRYI LVNIY+KSA+LLHSGSNSVVES SGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVIDQWKQSTTTDFD+S CNRLVNAFVEAGLNEKANSFV +LIQKNC+PT A
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

A0A1S3C0B7 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X12.4e-15191.47Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN  +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPIDAKTCETYTALLHSFAGSKLT+KAETLYEKIKES+IPLTALPFNEMMTLY S+GQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        IVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV+QILNEMN NPNSNE+WVRYI LVNIY+KSA+LLHSGSNSVVES SGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVIDQWKQSTTTDFD+S CNRLVNAFVEAGLNEKANSFV +LIQKNC+PT A
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

A0A5D3C6J0 Pentatricopeptide repeat-containing protein2.4e-15191.47Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MVTHN  +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPIDAKTCETYTALLHSFAGSKLT+KAETLYEKIKES+IPLTALPFNEMMTLY S+GQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        IVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV+QILNEMN NPNSNE+WVRYI LVNIY+KSA+LLHSGSNSVVES SGISQREWITYDLLIILYAGLG
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKD+IDQIWRSLRMTKQKMTSRNYICI+SCYLMLD LKEIGEVIDQWKQSTTTDFD+S CNRLVNAFVEAGLNEKANSFV +LIQKNC+PT A
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

A0A6J1GLW9 pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X16.8e-14689.76Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MV+HN+ ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPI+AKTCETYTALLHSFAGSKLTEKAETLYEK+KES IPLTALPFNEMMTLY SVGQVEKVSS
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG
        IVDDLKQ  VHPDIFTYNLWISSLAA LNIDGVR+IL+EMN NPNSNE WVRYINLVNIY+ SAHLLHS SNSVVESESGI+QREWITYDLLIILYAG+G
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLG

Query:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        NKDKIDQIWRSLRMT+QKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQS++ DFDVS CNRLVNAFVEAG  EK NSFVT+L  KNCEPTEA
Subjt:  NKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

SwissProt top hitse value%identityAlignment
O22714 Pentatricopeptide repeat-containing protein At1g607701.0e-4537.59Show/hide
Query:  SDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVH
        SD AI +DL+ K   I A E YF  LP  +KT  TY +LL+ +    LTEKAE L  K+KE NI  +++ +N +MTLY   G+ EKV +++ +LK   V 
Subjt:  SDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVH

Query:  PDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRS
        PD +TYN+W+ +LAA  +I GV +++ EMN +     DW  Y N+ +IYV  A L      ++ E E   +QR++  Y  LI LY  LG   ++ +IWRS
Subjt:  PDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRS

Query:  LRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKAN
        LR+   K ++  Y+ ++   + L+ L     +  +W+ + +T +D+ + N L+ A+ + GL +KAN
Subjt:  LRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKAN

Q8LPS6 Pentatricopeptide repeat-containing protein At1g021502.8e-3528.22Show/hide
Query:  FELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLK
        F LS SD AI++DL+ KV GI  AE +F  LP + K    Y +LL+++  +K  EKAE L   +++    L  LPFN MMTLYM++ + +KV ++V ++K
Subjt:  FELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLK

Query:  QRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKID
        Q+ +  DI++YN+W+SS  +  +++ +  +  +M  + +   +W  +  +  +Y+K         +++ + E+ I+ R  I Y  L+ LY  LGNK ++ 
Subjt:  QRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKID

Query:  QIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA
        ++W   +     + +  Y  ++S  + +  ++   +V ++W     + +D  + N L+NA+V+    E A      +++   +P+ +
Subjt:  QIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA

Q94B59 Pentatricopeptide repeat-containing protein At5g09450, mitochondrial5.3e-9558.82Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS
        MV H + ++SD+D+A RIDL++KVFGIDAAERYFEGL ID+KT ETYT+LLH++A SK TE+AE L+++I ES ++   A+ +NEMMTLYMSVGQVEKV 
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS

Query:  SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGL
         +++ LKQ+ V PDIFTYNLW+SS AA  NID +R+IL EM  + +SNE WVRYI+L +IY+ S+ + ++ S   VE+E  ISQREWITYD L+IL+ GL
Subjt:  SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGL

Query:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNC
        GNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+I QWK+S TT+FD S C R++NAF + GL   A+ F  +L+   C
Subjt:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNC

Q9SKU6 Pentatricopeptide repeat-containing protein At2g20710, mitochondrial3.5e-3828.92Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        M  H   E+S+ D AIR+DL+ KV G+  AE++FE +P++ +    Y ALL+ +A  K+  KAE +++++KE       LP+N M+ LY+  G+   V  
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL
        ++ +++   V PDIFT N  + + +   +++G+ + L     +   + DW  Y +  N Y+K A L       + +SE  + +Q+    Y++L+  Y   
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL

Query:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK
        G K+++ ++W SL        +  YI ++S  L +D ++E+ +++++W+   +  FD+ + + L+  + + G+ EKA   V +L+QK
Subjt:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK

Q9SY07 Pentatricopeptide repeat-containing protein At4g02820, mitochondrial4.0e-4230.95Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MV   D +L   D+A+ +DL++K+ G+++AE++FE +P   +     T+LLHS+  +KL++KAE L+EK+ E     + LP+N M+++Y+S GQ EKV  
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQI---LNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYA
        ++ +LK R   PDI TYNLW+++ A+  +++G  ++     E  LNP    DWV Y  L N+Y K+ + +     ++ E E  +S++  + Y  LI L+A
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQI---LNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYA

Query:  GLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPT
         LG+KD ++  W+ ++ + +KM    Y+ ++S  + L   ++   + D+W+  + T  D  + N ++  ++          F   +++K   P+
Subjt:  GLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPT

Arabidopsis top hitse value%identityAlignment
AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.2e-4737.59Show/hide
Query:  SDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVH
        SD AI +DL+ K   I A E YF  LP  +KT  TY +LL+ +    LTEKAE L  K+KE NI  +++ +N +MTLY   G+ EKV +++ +LK   V 
Subjt:  SDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVH

Query:  PDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRS
        PD +TYN+W+ +LAA  +I GV +++ EMN +     DW  Y N+ +IYV  A L      ++ E E   +QR++  Y  LI LY  LG   ++ +IWRS
Subjt:  PDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRS

Query:  LRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKAN
        LR+   K ++  Y+ ++   + L+ L     +  +W+ + +T +D+ + N L+ A+ + GL +KAN
Subjt:  LRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKAN

AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-3928.92Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        M  H   E+S+ D AIR+DL+ KV G+  AE++FE +P++ +    Y ALL+ +A  K+  KAE +++++KE       LP+N M+ LY+  G+   V  
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL
        ++ +++   V PDIFT N  + + +   +++G+ + L     +   + DW  Y +  N Y+K A L       + +SE  + +Q+    Y++L+  Y   
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL

Query:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK
        G K+++ ++W SL        +  YI ++S  L +D ++E+ +++++W+   +  FD+ + + L+  + + G+ EKA   V +L+QK
Subjt:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK

AT2G20710.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-3928.92Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        M  H   E+S+ D AIR+DL+ KV G+  AE++FE +P++ +    Y ALL+ +A  K+  KAE +++++KE       LP+N M+ LY+  G+   V  
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL
        ++ +++   V PDIFT N  + + +   +++G+ + L     +   + DW  Y +  N Y+K A L       + +SE  + +Q+    Y++L+  Y   
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGI-SQREWITYDLLIILYAGL

Query:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK
        G K+++ ++W SL        +  YI ++S  L +D ++E+ +++++W+   +  FD+ + + L+  + + G+ EKA   V +L+QK
Subjt:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQK

AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein2.8e-4330.95Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS
        MV   D +L   D+A+ +DL++K+ G+++AE++FE +P   +     T+LLHS+  +KL++KAE L+EK+ E     + LP+N M+++Y+S GQ EKV  
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSS

Query:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQI---LNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYA
        ++ +LK R   PDI TYNLW+++ A+  +++G  ++     E  LNP    DWV Y  L N+Y K+ + +     ++ E E  +S++  + Y  LI L+A
Subjt:  IVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQI---LNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYA

Query:  GLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPT
         LG+KD ++  W+ ++ + +KM    Y+ ++S  + L   ++   + D+W+  + T  D  + N ++  ++          F   +++K   P+
Subjt:  GLGNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPT

AT5G09450.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.8e-9658.82Show/hide
Query:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS
        MV H + ++SD+D+A RIDL++KVFGIDAAERYFEGL ID+KT ETYT+LLH++A SK TE+AE L+++I ES ++   A+ +NEMMTLYMSVGQVEKV 
Subjt:  MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS

Query:  SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGL
         +++ LKQ+ V PDIFTYNLW+SS AA  NID +R+IL EM  + +SNE WVRYI+L +IY+ S+ + ++ S   VE+E  ISQREWITYD L+IL+ GL
Subjt:  SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGL

Query:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNC
        GNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+I QWK+S TT+FD S C R++NAF + GL   A+ F  +L+   C
Subjt:  GNKDKIDQIWRSLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAACTCATAATGACTTTGAGTTATCTGATTCCGACTTTGCAATCCGCATCGACTTGATGACCAAAGTATTTGGCATCGATGCTGCTGAACGATACTTTGAA
GGTCTGCCTATTGATGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAACCCTTTATGAAAAAATA
AAGGAGTCAAATATACCTCTCACCGCTCTTCCATTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCAAGTAGAAAAGGTATCCTCAATTGTAGATGACCTG
AAACAAAGGATGGTTCATCCTGACATTTTCACTTATAATCTCTGGATCAGCTCTCTAGCTGCAGCTTTGAATATTGATGGTGTTAGACAGATTCTCAACGAGATG
AATCTTAACCCCAATTCAAACGAAGATTGGGTGCGATATATTAATCTCGTCAACATATACGTCAAGTCAGCTCATCTATTGCATTCAGGGTCGAACTCCGTAGTC
GAGTCTGAGAGTGGCATTTCTCAGCGAGAATGGATTACGTACGACCTCCTCATTATCTTGTATGCTGGTTTGGGAAACAAAGACAAAATTGATCAGATTTGGAGA
TCATTAAGGATGACAAAGCAAAAAATGACAAGCAGAAATTATATTTGCATTCTATCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGTGAAGTTATTGAT
CAGTGGAAACAATCAACTACAACAGATTTTGATGTTTCTGTTTGTAACAGGCTTGTAAATGCATTTGTTGAAGCTGGTTTGAATGAGAAAGCCAACAGTTTTGTT
ACCCTTTTGATTCAGAAAAACTGTGAACCCACAGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAACTCATAATGACTTTGAGTTATCTGATTCCGACTTTGCAATCCGCATCGACTTGATGACCAAAGTATTTGGCATCGATGCTGCTGAACGATACTTTGAA
GGTCTGCCTATTGATGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAACCCTTTATGAAAAAATA
AAGGAGTCAAATATACCTCTCACCGCTCTTCCATTCAACGAGATGATGACTTTGTACATGTCGGTCGGGCAAGTAGAAAAGGTATCCTCAATTGTAGATGACCTG
AAACAAAGGATGGTTCATCCTGACATTTTCACTTATAATCTCTGGATCAGCTCTCTAGCTGCAGCTTTGAATATTGATGGTGTTAGACAGATTCTCAACGAGATG
AATCTTAACCCCAATTCAAACGAAGATTGGGTGCGATATATTAATCTCGTCAACATATACGTCAAGTCAGCTCATCTATTGCATTCAGGGTCGAACTCCGTAGTC
GAGTCTGAGAGTGGCATTTCTCAGCGAGAATGGATTACGTACGACCTCCTCATTATCTTGTATGCTGGTTTGGGAAACAAAGACAAAATTGATCAGATTTGGAGA
TCATTAAGGATGACAAAGCAAAAAATGACAAGCAGAAATTATATTTGCATTCTATCTTGTTACCTGATGCTTGATCATTTGAAGGAAATTGGTGAAGTTATTGAT
CAGTGGAAACAATCAACTACAACAGATTTTGATGTTTCTGTTTGTAACAGGCTTGTAAATGCATTTGTTGAAGCTGGTTTGAATGAGAAAGCCAACAGTTTTGTT
ACCCTTTTGATTCAGAAAAACTGTGAACCCACAGAAGCATAG
Protein sequenceShow/hide protein sequence
MVTHNDFELSDSDFAIRIDLMTKVFGIDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDL
KQRMVHPDIFTYNLWISSLAAALNIDGVRQILNEMNLNPNSNEDWVRYINLVNIYVKSAHLLHSGSNSVVESESGISQREWITYDLLIILYAGLGNKDKIDQIWR
SLRMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSVCNRLVNAFVEAGLNEKANSFVTLLIQKNCEPTEA