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HG10018859 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018859
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:9806122..9806415
RNA-Seq ExpressionHG10018859
SyntenyHG10018859
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659718.1 classical arabinogalactan protein 10 [Cucumis sativus]1.2e-1368.52Show/hide
Query:  MASLRITLMAVMALLFLLSSTLAQSPAPSPKKSTHP--HSPSPH-----SHK--SAPSPSPSPSSAISPASPPAGAPAPAA--NAALSNTFAVAASLFAA
        MASL ITLMA+ A LFL++ST AQSPAPSPKKS HP  HSPSPH     SHK  S+PSPSPSPS   S + PPA A APA   N A++NTFAV+ASLF A
Subjt:  MASLRITLMAVMALLFLLSSTLAQSPAPSPKKSTHP--HSPSPH-----SHK--SAPSPSPSPSSAISPASPPAGAPAPAA--NAALSNTFAVAASLFAA

Query:  VSAAAFLF
        VSAAAFLF
Subjt:  VSAAAFLF
TrEMBL top hitse value%identityAlignment
A0A0A0K7F2 Uncharacterized protein6.0e-1468.52Show/hide
Query:  MASLRITLMAVMALLFLLSSTLAQSPAPSPKKSTHP--HSPSPH-----SHK--SAPSPSPSPSSAISPASPPAGAPAPAA--NAALSNTFAVAASLFAA
        MASL ITLMA+ A LFL++ST AQSPAPSPKKS HP  HSPSPH     SHK  S+PSPSPSPS   S + PPA A APA   N A++NTFAV+ASLF A
Subjt:  MASLRITLMAVMALLFLLSSTLAQSPAPSPKKSTHP--HSPSPH-----SHK--SAPSPSPSPSSAISPASPPAGAPAPAA--NAALSNTFAVAASLFAA

Query:  VSAAAFLF
        VSAAAFLF
Subjt:  VSAAAFLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTACGCATCACACTTATGGCAGTAATGGCGTTGTTGTTCTTGCTCAGCTCCACCCTGGCCCAGTCTCCGGCGCCGTCGCCAAAGAAATCAACCCACCCACA
CTCTCCTTCTCCCCATTCTCACAAATCGGCGCCTTCGCCTTCGCCTTCGCCTTCATCGGCCATTTCTCCCGCCTCCCCTCCCGCCGGTGCTCCTGCTCCTGCCGCTAATG
CTGCTCTTTCCAATACTTTCGCCGTCGCTGCTTCTCTCTTCGCCGCCGTCTCCGCCGCTGCTTTCCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTACGCATCACACTTATGGCAGTAATGGCGTTGTTGTTCTTGCTCAGCTCCACCCTGGCCCAGTCTCCGGCGCCGTCGCCAAAGAAATCAACCCACCCACA
CTCTCCTTCTCCCCATTCTCACAAATCGGCGCCTTCGCCTTCGCCTTCGCCTTCATCGGCCATTTCTCCCGCCTCCCCTCCCGCCGGTGCTCCTGCTCCTGCCGCTAATG
CTGCTCTTTCCAATACTTTCGCCGTCGCTGCTTCTCTCTTCGCCGCCGTCTCCGCCGCTGCTTTCCTCTTCTAG
Protein sequenceShow/hide protein sequence
MASLRITLMAVMALLFLLSSTLAQSPAPSPKKSTHPHSPSPHSHKSAPSPSPSPSSAISPASPPAGAPAPAANAALSNTFAVAASLFAAVSAAAFLF