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HG10018868 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018868
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationChr04:10061455..10061703
RNA-Seq ExpressionHG10018868
SyntenyHG10018868
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]1.3e-0849.32Show/hide
Query:  MANV---NQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLIS
        MAN    N S       S T+ PLN++LNQ+  IK+ R N+LLW+ LA PIL+ Y+LEG+LT EK CP K ++
Subjt:  MANV---NQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLIS

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]6.6e-0842.53Show/hide
Query:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD
        MAN   +  P +L S   ++ PLN++LNQ+  +K+ R N+LLW+ LA PIL+ Y+LEG+LT E  CP+  +     S  T   EG D
Subjt:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD

XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]6.6e-0842.53Show/hide
Query:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD
        MAN   +  P +L S   ++ PLN++LNQ+  +K+ R N+LLW+ LA PIL+ Y+LEG+LT E  CP+  +     S  T   EG D
Subjt:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]7.0e-1058.67Show/hide
Query:  TPVALVS---LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCP--NKLISRVTNNVEG
        TP A+VS    TS PLN+LLNQI  IKM R NFLLWQNLA PILRSY+L  YLT +K CP  + + +    N+EG
Subjt:  TPVALVS---LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCP--NKLISRVTNNVEG

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]2.9e-0848.57Show/hide
Query:  VNQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLISRVT
        +  STT     + ++ PLN++LNQ+  +K+ R N+LLWQ LA PIL+SY+L+G+LTEE  CP K I   T
Subjt:  VNQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLISRVT

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X13.2e-0842.53Show/hide
Query:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD
        MAN   +  P +L S   ++ PLN++LNQ+  +K+ R N+LLW+ LA PIL+ Y+LEG+LT E  CP+  +     S  T   EG D
Subjt:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X43.2e-0842.53Show/hide
Query:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD
        MAN   +  P +L S   ++ PLN++LNQ+  +K+ R N+LLW+ LA PIL+ Y+LEG+LT E  CP+  +     S  T   EG D
Subjt:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X33.2e-0842.53Show/hide
Query:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD
        MAN   +  P +L S   ++ PLN++LNQ+  +K+ R N+LLW+ LA PIL+ Y+LEG+LT E  CP+  +     S  T   EG D
Subjt:  MANVNQSTTPVALVS--LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLI-----SRVTNNVEGFD

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase6.4e-0949.32Show/hide
Query:  MANV---NQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLIS
        MAN    N S       S T+ PLN++LNQ+  IK+ R N+LLW+ LA PIL+ Y+LEG+LT EK CP K ++
Subjt:  MANV---NQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLIS

A0A6J1DCW4 uncharacterized protein LOC1110195983.4e-1058.67Show/hide
Query:  TPVALVS---LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCP--NKLISRVTNNVEG
        TP A+VS    TS PLN+LLNQI  IKM R NFLLWQNLA PILRSY+L  YLT +K CP  + + +    N+EG
Subjt:  TPVALVS---LTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCP--NKLISRVTNNVEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGTCAATCAATCAACCACACCAGTAGCACTTGTAAGTTTGACGAGTCATCCTCTAAATAAGCTTCTCAACCAGATTATGCCTATTAAAATGTATAGGTTGAA
TTTTTTGCTTTGGCAAAACCTAGCATGGCCAATCCTCCGCAGCTATAGGTTGGAAGGCTATTTGACTGAAGAGAAATCTTGCCCAAATAAACTCATTAGCAGGGTGACCA
ACAATGTTGAAGGATTTGATGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGTCAATCAATCAACCACACCAGTAGCACTTGTAAGTTTGACGAGTCATCCTCTAAATAAGCTTCTCAACCAGATTATGCCTATTAAAATGTATAGGTTGAA
TTTTTTGCTTTGGCAAAACCTAGCATGGCCAATCCTCCGCAGCTATAGGTTGGAAGGCTATTTGACTGAAGAGAAATCTTGCCCAAATAAACTCATTAGCAGGGTGACCA
ACAATGTTGAAGGATTTGATGGAAATTAA
Protein sequenceShow/hide protein sequence
MANVNQSTTPVALVSLTSHPLNKLLNQIMPIKMYRLNFLLWQNLAWPILRSYRLEGYLTEEKSCPNKLISRVTNNVEGFDGN