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HG10018883 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018883
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontobamovirus multiplication protein 1-like
Genome locationChr04:10380856..10381047
RNA-Seq ExpressionHG10018883
SyntenyHG10018883
Gene Ontology termsGO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009457 - THH1/TOM1/TOM3 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022540.1 Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-1290.24Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYY LSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

XP_008455199.1 PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo]2.6e-1277.08Show/hide
Query:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        MARAL TITST GGF+WWN ID+SE WQKGIYY L+ASY +IS IALV
Subjt:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

XP_022988878.1 tobamovirus multiplication protein 1-like [Cucurbita maxima]3.4e-1292.68Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYYALSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

XP_023530045.1 tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo]3.4e-1292.68Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYYALSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

XP_038888866.1 tobamovirus multiplication protein 1-like isoform X1 [Benincasa hispida]8.0e-1483.33Show/hide
Query:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        MARAL TITSTVGG +WWN IDES+DWQ+GIYY LSASYGLIS IALV
Subjt:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

TrEMBL top hitse value%identityAlignment
A0A0A0K5Z8 DUF1084 domain-containing protein6.2e-1279.17Show/hide
Query:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        MARAL TITST+GGF+ WN ID+S+ WQKGIYYALSASY LIS IALV
Subjt:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

A0A1S3C0C4 tobamovirus multiplication protein 1-like isoform X11.3e-1277.08Show/hide
Query:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        MARAL TITST GGF+WWN ID+SE WQKGIYY L+ASY +IS IALV
Subjt:  MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

A0A6J1EJD7 tobamovirus multiplication protein 1-like isoform X34.8e-1290.24Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYY LSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

A0A6J1EME9 tobamovirus multiplication protein 1-like isoform X14.8e-1290.24Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYY LSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

A0A6J1JNL1 tobamovirus multiplication protein 1-like1.6e-1292.68Show/hide
Query:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV
        ITS VGGFEWWN IDESEDWQKGIYYALSASYGLIS IALV
Subjt:  ITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALV

SwissProt top hitse value%identityAlignment
Q402F4 Tobamovirus multiplication protein 12.7e-0456.25Show/hide
Query:  WWNGIDESEDWQKGIYYALSASYGLISFIALV
        WW+ I+ES  WQ GI+Y+L ASY L+S +AL+
Subjt:  WWNGIDESEDWQKGIYYALSASYGLISFIALV

Arabidopsis top hitse value%identityAlignment
AT4G21790.1 tobamovirus multiplication 19.5e-0550Show/hide
Query:  WWNGIDESEDWQKGIYYALSASYGLISFIALV
        WW+ ++ES  WQ GI++AL  +Y L+S +ALV
Subjt:  WWNGIDESEDWQKGIYYALSASYGLISFIALV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGGCTTTACGGACAATCACCTCTACGGTTGGGGGATTTGAATGGTGGAATGGAATTGATGAATCGGAGGATTGGCAGAAAGGGATTTACTACGCCTTGTCCGC
CTCTTATGGCCTTATCTCTTTCATTGCCTTAGTACTCCACTTTTCTCTATTCCTTACCGTCTTTTTGTTCTGTATCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGGCTTTACGGACAATCACCTCTACGGTTGGGGGATTTGAATGGTGGAATGGAATTGATGAATCGGAGGATTGGCAGAAAGGGATTTACTACGCCTTGTCCGC
CTCTTATGGCCTTATCTCTTTCATTGCCTTAGTACTCCACTTTTCTCTATTCCTTACCGTCTTTTTGTTCTGTATCTTCTGA
Protein sequenceShow/hide protein sequence
MARALRTITSTVGGFEWWNGIDESEDWQKGIYYALSASYGLISFIALVLHFSLFLTVFLFCIF