| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031520.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | 5.4e-45 | 55.39 | Show/hide |
Query: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
+LLDLRDSKEAVYGALDAWVAWEQDFPIASLKH LAALEKEQQWHR+VQ
Subjt: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
Query: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
LFKDLEAFGRKPP+KSIVQRVADACE+LGL+EEKERVL+KYKYLF D+K S+KKYK+VSFEK KRK KSTKG+E NSNL
Subjt: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
Query: MKAQ
+K++
Subjt: MKAQ
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| XP_004136857.2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis sativus] | 8.3e-46 | 55.67 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLDLRDSKEAVYGALDAWVAWEQDFPIA LKH LAALEKEQQWHR+VQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPP+KSIVQRVADACE+LGL+EEKERVL+KYKYLF D+K+G +KKYK++SFEKSKRK KSTKGTE NSNL+
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: KAQ
K++
Subjt: KAQ
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| XP_008455250.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis melo] | 7.1e-45 | 55.67 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLDLRDSKEAVYGALDAWVAWEQDFPIASLKH LAALEKEQQWHR+VQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPP+KSIVQRVADACE+LGL+EEKERVL+KYKYLF D+K S+KKYK+VSFEK KRK KSTKG+E NSNL+
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: KAQ
K++
Subjt: KAQ
|
|
| XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida] | 6.2e-49 | 59.11 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLDLRDSKEAVYGALDAWVAWEQDFPI SLKH L LEKEQQWHRVVQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPPEKSIVQRVADACEILGL+EEKERVLMKYKYLFTD+K+GSIKKYK+VSFEKSK K KSTK TE NSNLM
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: KAQ
KAQ
Subjt: KAQ
|
|
| XP_038887985.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Benincasa hispida] | 1.6e-49 | 59.31 | Show/hide |
Query: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
KLLDLRDSKEAVYGALDAWVAWEQDFPI SLKH L LEKEQQWHRVVQ
Subjt: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
Query: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
LFKDLEAFGRKPPEKSIVQRVADACEILGL+EEKERVLMKYKYLFTD+K+GSIKKYK+VSFEKSK K KSTK TE NSNL
Subjt: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
Query: MKAQ
MKAQ
Subjt: MKAQ
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C174 pentatricopeptide repeat-containing protein At4g18975, chloroplastic | 3.4e-45 | 55.67 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLDLRDSKEAVYGALDAWVAWEQDFPIASLKH LAALEKEQQWHR+VQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPP+KSIVQRVADACE+LGL+EEKERVL+KYKYLF D+K S+KKYK+VSFEK KRK KSTKG+E NSNL+
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: KAQ
K++
Subjt: KAQ
|
|
| A0A5A7SLC0 Pentatricopeptide repeat-containing protein | 2.6e-45 | 55.39 | Show/hide |
Query: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
+LLDLRDSKEAVYGALDAWVAWEQDFPIASLKH LAALEKEQQWHR+VQ
Subjt: KLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ---------------------------------------------------
Query: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
LFKDLEAFGRKPP+KSIVQRVADACE+LGL+EEKERVL+KYKYLF D+K S+KKYK+VSFEK KRK KSTKG+E NSNL
Subjt: --------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNL
Query: MKAQ
+K++
Subjt: MKAQ
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| A0A6J1HFH8 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 | 3.3e-40 | 53.23 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
L+DLRDSKEAVYGALDAWVAWEQDFPIASLKHALA LEKE QWHRVVQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFK+LEAFGRKPPEKSIVQRVADACE+LGLVEEKERVL+KY YLFTD+K GSIKKY K K KSTKG + NS+LM
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: K
K
Subjt: K
|
|
| A0A6J1HSN2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 | 8.7e-41 | 53.73 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
L+DLRDSKEAVYGALDAWVAWEQDFPIASLKHALA LEKE QWHRVVQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPPEKSIVQRVADACE+LGLVEEKERVL+KY YLFTD+K GSIKKY K K KSTKG + NS+LM
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: K
K
Subjt: K
|
|
| A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 | 8.7e-41 | 53.73 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
L+DLRDSKEAVYGALDAWVAWEQDFPIASLKHALA LEKE QWHRVVQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
LFKDLEAFGRKPPEKSIVQRVADACE+LGLVEEKERVL+KY YLFTD+K GSIKKY K K KSTKG + NS+LM
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLFTDDKDGSIKKYKKVSFEKSKRKGKSTKGTEVNSNLM
Query: K
K
Subjt: K
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1) | 2.3e-25 | 39.23 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLD+ D+KEAVYGALDAWVAWE++FPIASLK +A+LEKE QWHR+VQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLF----TDDKDGSIKKYKK
LFKDLE++ RKPP+K IVQ VADA E+LG+++EKERV+ KY +L +DDK + KK
Subjt: -------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLF----TDDKDGSIKKYKK
|
|
| AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4) | 5.1e-25 | 38.59 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
LLD+ D+KEAVYGALDAWVAWE++FPIASLK +A+LEKE QWHR+VQ
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQ----------------------------------------------------
Query: ----------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLF----TDDKDGSIKKYKK
LFKDLE++ RKPP+K IVQ VADA E+LG+++EKERV+ KY +L +DDK + KK
Subjt: ----------------------LFKDLEAFGRKPPEKSIVQRVADACEILGLVEEKERVLMKYKYLF----TDDKDGSIKKYKK
|
|
| AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.2e-10 | 58.82 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
L L + KEAVYGAL+ WVAWE +FPI + AL L K QWHRV+QL K
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
|
|
| AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein | 1.2e-10 | 58.82 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
L L + KEAVYGAL+ WVAWE +FPI + AL L K QWHRV+QL K
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
|
|
| AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein | 1.2e-10 | 58.82 | Show/hide |
Query: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
L L + KEAVYGAL+ WVAWE +FPI + AL L K QWHRV+QL K
Subjt: LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRVVQLFK
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