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HG10018948 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018948
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDynamin-type G domain-containing protein
Genome locationChr04:12180313..12181174
RNA-Seq ExpressionHG10018948
SyntenyHG10018948
Gene Ontology termsGO:0007623 - circadian rhythm (biological process)
GO:0009739 - response to gibberellin (biological process)
GO:0010020 - chloroplast fission (biological process)
GO:0016559 - peroxisome fission (biological process)
GO:0005777 - peroxisome (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0009707 - chloroplast outer membrane (cellular component)
GO:0035452 - extrinsic component of plastid membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0008017 - microtubule binding (molecular function)
GO:0042802 - identical protein binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031527.1 dynamin-like protein ARC5 [Cucumis melo var. makuwa]2.4e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
XP_004136854.1 dynamin-like protein ARC5 isoform X1 [Cucumis sativus]2.4e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
XP_008455264.1 PREDICTED: dynamin-like protein ARC5 [Cucumis melo]2.4e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
XP_010269087.1 PREDICTED: dynamin-like protein ARC5 isoform X1 [Nelumbo nucifera]3.1e-1788.46Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDER+NGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
XP_031744663.1 dynamin-like protein ARC5 isoform X2 [Cucumis sativus]2.4e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
TrEMBL top hitse value%identityAlignment
A0A0A0K2F7 Dynamin-type G domain-containing protein1.1e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
A0A1S3C0N0 dynamin-like protein ARC51.1e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
A0A1U8AZW1 dynamin-like protein ARC5 isoform X11.5e-1788.46Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDER+NGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
A0A5A7SPX3 Dynamin-like protein ARC51.1e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
A0A5D3C6M4 Dynamin-like protein ARC51.1e-1790.38Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
SwissProt top hitse value%identityAlignment
Q84N64 Dynamin-like protein ARC51.9e-1782.69Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDER  GGAFVGTDGLQF  KLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
Arabidopsis top hitse value%identityAlignment
AT3G19720.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.3e-1882.69Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDER  GGAFVGTDGLQF  KLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
AT3G19720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.3e-1882.69Show/hide
Query:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFGETLQDER  GGAFVGTDGLQF  KLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
AT3G19720.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein9.9e-1451.81Show/hide
Query:  QLSLLLKGTVVAPPDKFG-------------------------------ETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY
        +LSLLLKGTVVAPPDKFG                               ETLQDER  GGAFVGTDGLQF  KLIP  G  LY
Subjt:  QLSLLLKGTVVAPPDKFG-------------------------------ETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTTATCTTTGCTATTAAAAGGAACAGTTGTTGCTCCTCCAGATAAATTTGGTGAAACACTACAAGATGAAAGAATCAATGGAGGGGCTTTTGTTGGTACTGACGG
TCTTCAATTTCCACAGAAACTAATTCCGGTACGAGGCACATCTTTATATACAAGGAAGCTGGATGCTCGGACAGCTTTATGTCTAGATGCTCAATGTGGTAAACCAACTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTTATCTTTGCTATTAAAAGGAACAGTTGTTGCTCCTCCAGATAAATTTGGTGAAACACTACAAGATGAAAGAATCAATGGAGGGGCTTTTGTTGGTACTGACGG
TCTTCAATTTCCACAGAAACTAATTCCGGTACGAGGCACATCTTTATATACAAGGAAGCTGGATGCTCGGACAGCTTTATGTCTAGATGCTCAATGTGGTAAACCAACTT
GA
Protein sequenceShow/hide protein sequence
MQLSLLLKGTVVAPPDKFGETLQDERINGGAFVGTDGLQFPQKLIPVRGTSLYTRKLDARTALCLDAQCGKPT