; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10018971 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018971
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr04:12811494..12812105
RNA-Seq ExpressionHG10018971
SyntenyHG10018971
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4353346.1 hypothetical protein F8388_015757, partial [Cannabis sativa]4.9e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

KAF4382287.1 hypothetical protein G4B88_011616 [Cannabis sativa]4.9e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

KAF4389186.1 hypothetical protein F8388_026915 [Cannabis sativa]4.9e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

KAF4390164.1 hypothetical protein G4B88_005082 [Cannabis sativa]4.9e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F+W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]2.0e-2936.67Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLLDSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSLY
        +WG EL+ +G+R+ +G+G    VF DPW+PRP +    T   GN  +MV+ L++ +GQW+++ I  +    DS+ IL++P+      D W+ HF     Y
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLLDSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSLY

Query:  TVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPSGHKLFLPSGHKLFLRHIDIDPRCPLC
        +VKSGY LA     + PSSS    + WW   W    P K+ HF W+ FH          LPS   LF R       CP+C
Subjt:  TVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPSGHKLFLPSGHKLFLRHIDIDPRCPLC

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248745.2e-2836.11Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLLDSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSLY
        +WG +L+ +G+R  VG+G+ I  FSDPWLPRPT  +    N+G  D  VAS + ++G WDV  I       D   IL++P+      D W+ H+     Y
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLLDSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSLY

Query:  TVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPSGHKLFLPSGHKLFLRHIDIDPRCPLC
        +V+SGY L         S+STN     W  +WK   P K+K F+W++ H  I        P+   L LR I   P C +C
Subjt:  TVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPSGHKLFLPSGHKLFLRHIDIDPRCPLC

A0A7J6E4W2 zf-RVT domain-containing protein2.4e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

A0A7J6GHF5 zf-RVT domain-containing protein2.4e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

A0A7J6H1T6 zf-RVT domain-containing protein2.4e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

A0A7J6H4L1 zf-RVT domain-containing protein2.4e-2838.71Show/hide
Query:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL
        +WG  L+ +G+RK VG G  I VF DPWLPRP   R +     N +L+V  L+ +S   W++  +R L  + D + I +LP+      D W+ H+     
Subjt:  MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLL-DSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSL

Query:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS
        Y+VKSGYF+A Q +   PS S + ++ WWK  WK + P KV  F+W+ FH+ +P+
Subjt:  YTVKSGYFLAFQRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGTTTGGAGTTGATTAAACAGGGGATTAGGAAGGAGGTGGGTGATGGAACTTTTATTAATGTCTTCTCGGATCCTTGGCTTCCTAGGCCAACTGCGTGCAGAGT
GTTTACCCCTAATTCTGGAAATAGTGATTTGATGGTTGCATCTTTATTGGATTCTAATGGCCAATGGGATGTAAATAAAATTAGGAGTTTGTTATTTCTAGTGGACTCTA
AAGAGATCCTTAATCTACCGTTGAGGGGGATTAGAGACTTTGATCAATGGATTTGCCATTTTCATGGGTCAAGTTTGTATACGGTAAAAAGTGGATACTTTTTAGCCTTC
CAAAGAAATGTCATGGGGCCGTCTTCAAGCACGAATGGTTGGTCAGACTGGTGGAAGAGAGTTTGGAAAGCCAATTTTCCTGTTAAGGTCAAGCACTTTCTGTGGCAGGC
TTTCCATAATTTTATTCCATCCGGTCATAAACTTTTTCTTCCATCCGGTCATAAACTTTTTCTTCGTCATATTGATATTGATCCCAGGTGTCCATTGTGTAAGGTGACAT
GGAATCAATTGAGCATTCTATCTTTGAGTGTGAAAGAGCCAAGAGTATTTGGAGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGTTTGGAGTTGATTAAACAGGGGATTAGGAAGGAGGTGGGTGATGGAACTTTTATTAATGTCTTCTCGGATCCTTGGCTTCCTAGGCCAACTGCGTGCAGAGT
GTTTACCCCTAATTCTGGAAATAGTGATTTGATGGTTGCATCTTTATTGGATTCTAATGGCCAATGGGATGTAAATAAAATTAGGAGTTTGTTATTTCTAGTGGACTCTA
AAGAGATCCTTAATCTACCGTTGAGGGGGATTAGAGACTTTGATCAATGGATTTGCCATTTTCATGGGTCAAGTTTGTATACGGTAAAAAGTGGATACTTTTTAGCCTTC
CAAAGAAATGTCATGGGGCCGTCTTCAAGCACGAATGGTTGGTCAGACTGGTGGAAGAGAGTTTGGAAAGCCAATTTTCCTGTTAAGGTCAAGCACTTTCTGTGGCAGGC
TTTCCATAATTTTATTCCATCCGGTCATAAACTTTTTCTTCCATCCGGTCATAAACTTTTTCTTCGTCATATTGATATTGATCCCAGGTGTCCATTGTGTAAGGTGACAT
GGAATCAATTGAGCATTCTATCTTTGAGTGTGAAAGAGCCAAGAGTATTTGGAGTTGTCTGA
Protein sequenceShow/hide protein sequence
MWGLELIKQGIRKEVGDGTFINVFSDPWLPRPTACRVFTPNSGNSDLMVASLLDSNGQWDVNKIRSLLFLVDSKEILNLPLRGIRDFDQWICHFHGSSLYTVKSGYFLAF
QRNVMGPSSSTNGWSDWWKRVWKANFPVKVKHFLWQAFHNFIPSGHKLFLPSGHKLFLRHIDIDPRCPLCKVTWNQLSILSLSVKEPRVFGVV