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HG10018973 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018973
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:12824826..12825739
RNA-Seq ExpressionHG10018973
SyntenyHG10018973
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038885414.1 nucleolar protein 58-like [Benincasa hispida]7.2e-0845.83Show/hide
Query:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL
        G  V F A++IN L+++RDN  A G+ II     ELM+DA++V+A+P  +W  SP  I TL S+ L+PE  L
Subjt:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL

XP_038888747.1 vicilin-like seed storage protein At2g18540 [Benincasa hispida]1.5e-0537.21Show/hide
Query:  VVNGCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANLPDFVIISKGAP
        ++ G  V F AR+IN L+K++D L A GN II       M+D +RV+ +  ++W  S   I TL S  L+PEA L  +++  +  P
Subjt:  VVNGCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANLPDFVIISKGAP

XP_038896576.1 protein PXR1-like [Benincasa hispida]1.1e-0541.67Show/hide
Query:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL
        G  VSF A++IN +++++D+  A  N II   + E M+DA+RV+ +P  KW  S   IHTL S+ L+ E  L
Subjt:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]1.3e-0634.65Show/hide
Query:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANLPDFVI------------ISKGAPKPKVV
        G  V F  + IN L+++RDN  A GN II   + ELM++A++V+A+P ++W  SP  I TL S+ L+ +  L  +++            +SK    P+V 
Subjt:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANLPDFVI------------ISKGAPKPKVV

Query:  C
        C
Subjt:  C

XP_038902322.1 protein PXR1-like [Benincasa hispida]1.3e-0945.83Show/hide
Query:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL
        G  V F A++IN L++++DNL A GN I+   + ELM DA+RV+ +P ++W  SP  IHTL  + L+PE  L
Subjt:  GCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTCAATGGATGTGAAGTCTCATTCAAAGCCAGAGAGATCAACGCGTTATTCAAACTGAGGGACAACCTGAAAGCTGAAGGCAACCACATCATTGCCCATAC
TTCAAGCGAACTCATGCAAGACGCTATCCGGGTTATGGCCAAGCCAAGATCCAAATGGAAGACTTCACCCACAAGCATTCATACTTTGCCTTCAAGATGCCTCATGCCTG
AGGCCAACCTTCCTGACTTCGTTATCATATCAAAGGGAGCTCCCAAGCCTAAAGTCGTTTGCCCGTCACTGCCCCCCAAGCTTAAGAAAAAAAAGATGGGAGTGGAAGTC
GTTCGAGAAGAGGATCCGGTGGCTAGTCCTGAGGCCAGTGATGAAATTCCAGACAACCTTTCCTCGCAGCAATCCCCTGAACAGTCTCCACCCCCACCTTCACCAAAATT
CTATTCCCCTCCCTCTCCCAAAAATCCAACTCCCTCTCCCCCAATCCAAACAAACCAAGTTCATGAGTCACTCAAAGGTGGCAAAGATGCAGGCACCTCGCGTACTTTGC
CACCTGTGACTGAGGAGACTTGGGTGCCCCTCCTCCACATTCCCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGTCAATGGATGTGAAGTCTCATTCAAAGCCAGAGAGATCAACGCGTTATTCAAACTGAGGGACAACCTGAAAGCTGAAGGCAACCACATCATTGCCCATAC
TTCAAGCGAACTCATGCAAGACGCTATCCGGGTTATGGCCAAGCCAAGATCCAAATGGAAGACTTCACCCACAAGCATTCATACTTTGCCTTCAAGATGCCTCATGCCTG
AGGCCAACCTTCCTGACTTCGTTATCATATCAAAGGGAGCTCCCAAGCCTAAAGTCGTTTGCCCGTCACTGCCCCCCAAGCTTAAGAAAAAAAAGATGGGAGTGGAAGTC
GTTCGAGAAGAGGATCCGGTGGCTAGTCCTGAGGCCAGTGATGAAATTCCAGACAACCTTTCCTCGCAGCAATCCCCTGAACAGTCTCCACCCCCACCTTCACCAAAATT
CTATTCCCCTCCCTCTCCCAAAAATCCAACTCCCTCTCCCCCAATCCAAACAAACCAAGTTCATGAGTCACTCAAAGGTGGCAAAGATGCAGGCACCTCGCGTACTTTGC
CACCTGTGACTGAGGAGACTTGGGTGCCCCTCCTCCACATTCCCCACTAA
Protein sequenceShow/hide protein sequence
MAVVNGCEVSFKAREINALFKLRDNLKAEGNHIIAHTSSELMQDAIRVMAKPRSKWKTSPTSIHTLPSRCLMPEANLPDFVIISKGAPKPKVVCPSLPPKLKKKKMGVEV
VREEDPVASPEASDEIPDNLSSQQSPEQSPPPPSPKFYSPPSPKNPTPSPPIQTNQVHESLKGGKDAGTSRTLPPVTEETWVPLLHIPH