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HG10018976 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10018976
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr04:12883262..12883675
RNA-Seq ExpressionHG10018976
SyntenyHG10018976
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]2.0e-6596.35Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLR+FETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_008449396.1 PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]1.3e-6494.89Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLR+FETHFGIDVKPDP+ELSSVYSSLFLQFD DSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]2.0e-6596.35Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLR+FETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]1.6e-5988.32Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVED+ AF AFIRDRFAHLDTNHDGLLSY+EML EL +LR+FE HFGIDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]1.0e-6697.08Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTNHDGLLSY+EMLEELHTLR+FETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein9.5e-6696.35Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTN DGLLSYSEMLEELHTLR+FETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A1S3BLY5 uncharacterized protein LOC1034912946.2e-6594.89Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLR+FETHFGIDVKPDP+ELSSVYSSLFLQFD DSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A5D3E445 Calcium-binding EF-hand family protein6.2e-6594.89Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLR+FETHFGIDVKPDP+ELSSVYSSLFLQFD DSSGTVDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1C5B4 uncharacterized protein LOC1110075327.8e-6088.32Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVED+ AF AFIRDRFAHLDTNHDGLLSY+EML EL +LR+FE HFGIDVKPDPDELS+VYSSLFLQFD DSSG VDLDEF AETKR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        MMLA ANGMGFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1JN55 uncharacterized protein LOC1114861982.8e-5786.67Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        MSVEILDSATI+NFVED+ AFGAFI DRFAHLDTNHDGLLSYSEML+EL +LR+ E  FGIDVKPDPDELSSVYSS+FLQFDR+SSGTVDLDEF AE KR
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIM
        MMLAMANG+G LPVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein4.7e-0932.81Show/hide
Query:  ILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMMLA
        ++ S T+I F+ D  +F +   D F  LD + +G+LS SE+ + L+ +   E+    +V P  DE  +VY+++F +F  D     +  + +AE   ++ A
Subjt:  ILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMMLA

Query:  MANGMGFLPVQMVLEEGSFLMKAVERET
        MA G+G  PV MV+     +MKAV  E+
Subjt:  MANGMGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein2.7e-2843.7Show/hide
Query:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR
        M V ++D +T+ +FV+D+  F   + +RFA LD N DG+LS SE+ +   ++R+ E+HFG+DV    DEL+++Y S+F +FD D SG+VDL+EF +E K+
Subjt:  MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKR

Query:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein1.7e-0624.8Show/hide
Query:  EILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMML
        ++LD + I+  VE++  F  F+  +F  LD + DG LS +E+   +  +       G+  +    +   +YS +  +F   S   V   EF      ++L
Subjt:  EILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMML

Query:  AMANGMGFLPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGMGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAAATATTGGATAGTGCCACCATCATCAACTTCGTCGAAGACGATGTAGCTTTTGGTGCATTCATAAGAGACCGTTTTGCTCACCTCGACACCAACCATGA
TGGTCTGCTTTCCTACAGTGAAATGTTGGAGGAGTTGCACACCCTCAGGATCTTCGAGACCCATTTTGGGATCGATGTGAAACCTGATCCAGATGAGCTTTCTTCCGTCT
ATAGTTCTCTGTTCTTGCAGTTTGATCGTGACTCGAGCGGAACGGTTGATCTGGATGAATTTATGGCTGAGACCAAAAGGATGATGTTAGCTATGGCTAATGGGATGGGC
TTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACCGCAATAATGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAAATATTGGATAGTGCCACCATCATCAACTTCGTCGAAGACGATGTAGCTTTTGGTGCATTCATAAGAGACCGTTTTGCTCACCTCGACACCAACCATGA
TGGTCTGCTTTCCTACAGTGAAATGTTGGAGGAGTTGCACACCCTCAGGATCTTCGAGACCCATTTTGGGATCGATGTGAAACCTGATCCAGATGAGCTTTCTTCCGTCT
ATAGTTCTCTGTTCTTGCAGTTTGATCGTGACTCGAGCGGAACGGTTGATCTGGATGAATTTATGGCTGAGACCAAAAGGATGATGTTAGCTATGGCTAATGGGATGGGC
TTCTTACCTGTTCAGATGGTGTTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACCGCAATAATGGCCGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSATIINFVEDDVAFGAFIRDRFAHLDTNHDGLLSYSEMLEELHTLRIFETHFGIDVKPDPDELSSVYSSLFLQFDRDSSGTVDLDEFMAETKRMMLAMANGMG
FLPVQMVLEEGSFLMKAVERETAIMAA