; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019011 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019011
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationChr04:14022701..14026845
RNA-Seq ExpressionHG10019011
SyntenyHG10019011
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041779.1 uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa]3.2e-1643.86Show/hide
Query:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN
        P R TQ       +   + K PT+  VP V +DG+SF  EE    WKF+++R IVD   +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVN
Subjt:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN

Query:  LTANFYDQESPDFQ
        L   F D  S D+Q
Subjt:  LTANFYDQESPDFQ

KAA0045418.1 uncharacterized protein E6C27_scaffold294G00110 [Cucumis melo var. makuwa]1.1e-1644.12Show/hide
Query:  GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL
        G+ K P +  +PPVL+DG+SF  EE    WKF+V+R I DE  +S++   C+ +M L+  A L + + ++GPFYPQ+++EF+VNL A+F D  SP    L
Subjt:  GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL

Query:  LS
         S
Subjt:  LS

TYK27067.1 uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa]3.2e-1643.86Show/hide
Query:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN
        P R TQ       +   + K PT+  VP V +DG+SF  EE    WKF+++R IVD   +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVN
Subjt:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN

Query:  LTANFYDQESPDFQ
        L   F D  S D+Q
Subjt:  LTANFYDQESPDFQ

XP_008457264.1 PREDICTED: uncharacterized protein LOC103496990 [Cucumis melo]6.5e-1744.64Show/hide
Query:  PTRVTQVSSK----GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT
        P R TQ + K      D++  S  VP V +DG+SF  EE    WKF+++R IVDE  +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVNL 
Subjt:  PTRVTQVSSK----GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT

Query:  ANFYDQESPDFQ
          F D  S  +Q
Subjt:  ANFYDQESPDFQ

XP_038904247.1 uncharacterized protein LOC120090596 [Benincasa hispida]1.9e-1639.33Show/hide
Query:  ASPETSDHESEENFSE-------KESDWGFVNSSDNDKFGPTRVTQVSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQD
        +S E+ D  S  +FS         +S      SS  D     R    +  G+ K P +  VP VL+D +SF SE+    WKF+V+R IVDEK  S++T+ 
Subjt:  ASPETSDHESEENFSE-------KESDWGFVNSSDNDKFGPTRVTQVSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQD

Query:  CIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL
        C+++M LL +  L + V+NL PFYPQ++RE IVNL + F D  +PD++K+
Subjt:  CIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL

TrEMBL top hitse value%identityAlignment
A0A1S3C6D9 uncharacterized protein LOC1034969903.2e-1744.64Show/hide
Query:  PTRVTQVSSK----GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT
        P R TQ + K      D++  S  VP V +DG+SF  EE    WKF+++R IVDE  +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVNL 
Subjt:  PTRVTQVSSK----GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT

Query:  ANFYDQESPDFQ
          F D  S  +Q
Subjt:  ANFYDQESPDFQ

A0A5A7TK74 Uncharacterized protein1.6e-1643.86Show/hide
Query:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN
        P R TQ       +   + K PT+  VP V +DG+SF  EE    WKF+++R IVD   +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVN
Subjt:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN

Query:  LTANFYDQESPDFQ
        L   F D  S D+Q
Subjt:  LTANFYDQESPDFQ

A0A5A7TRD1 Uncharacterized protein5.4e-1744.12Show/hide
Query:  GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL
        G+ K P +  +PPVL+DG+SF  EE    WKF+V+R I DE  +S++   C+ +M L+  A L + + ++GPFYPQ+++EF+VNL A+F D  SP    L
Subjt:  GKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKL

Query:  LS
         S
Subjt:  LS

A0A5A7URQ6 Uncharacterized protein3.5e-1641.07Show/hide
Query:  PTRVTQVSSKG----KDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT
        P R TQ + +      D++   + VP V +DG+SF  EE    WKF++++ IVDE  +S++ Q C+ +M L+  A LE+ + ++GPFYPQ++REFIVNL 
Subjt:  PTRVTQVSSKG----KDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLT

Query:  ANFYDQESPDFQ
          F +  S D+Q
Subjt:  ANFYDQESPDFQ

A0A5D3DTI5 Uncharacterized protein1.6e-1643.86Show/hide
Query:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN
        P R TQ       +   + K PT+  VP V +DG+SF  EE    WKF+++R IVD   +S++ Q C+ +M L+  A LE+ + N+GPFYPQ++REFIVN
Subjt:  PTRVTQ------VSSKGKDKRPTSSFVPPVLLDGVSFPSEEGANLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVN

Query:  LTANFYDQESPDFQ
        L   F D  S D+Q
Subjt:  LTANFYDQESPDFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAACTAGACAGAGAACCCACACTTTCGATGGCAAGATGAAAGCTAAGCAAAAGCTGATTGTTGAAGATGACGATCCTCCTGCCATGACTAACAAGTACGGTGT
TCGTGTTCGGGGTTTTCTTGTTGCCCAATCTGAGATTAGGGTTCCTCCTCCCTCAGCCAAGAAGAGACGAACTAGAGCCAATCAACCCTCTGAATCCAAAGGGAAAGATA
AGGTAAGTCTATCATCTCTCACATTAACTGATTTGATAGGAACTGGAGTGGAAATTCTTCTAGAAAAGGAGAAATCCTCTTCTAGTAACTCCTCAGGGCACATGCATGAT
TTTGTTGTTCGTCGTAGAAACCCTACTGAAATTATTGAATCGACTGCACTTATTGATGAAGAAGTTAGGTCTTGTGTTGTTGCTATTCCTGTTGTTACTACATCTTGTGT
TGTTGAAAATATTGTTGCTGGTTTGAGTGAGCCAAATATTACTGGTTCTGAAAATATTTTGTTTGAAGAAGAAGGTGTTAAGCCTTTGTCTGAGACATCTGATATGGGAG
ATGTTGAAAGACATGGTGAGGTTTGCGTTGATAAGACTAATGCTTCAACTGAAGCAAAGGCTGTTGAAGGTGAGTTTGCTGGTGATATTGACCAAGGTGTTAGTTGCCAC
TCTACTGAAAATCCTCATAGCCTGCTCAAGATGATAAAAATGATGAAGATAGTGAAAGGCGTCTCTCCTTCACCTGGATCTCCGTTGAAGGAAAAGGAAGATGTTGTGGA
TAGAGTCGAGGCATCTCCTGAGACATCTGATCATGAGTCTGAAGAAAATTTCTCCGAAAAAGAGTCTGATTGGGGTTTTGTTAATAGTTCTGACAATGACAAGTTTGGTC
CAACTCGTGTTACTCAAGTTTCTTCCAAAGGCAAAGATAAACGACCAACTTCCTCCTTTGTTCCCCCAGTGCTACTGGATGGAGTATCCTTTCCCTCTGAGGAGGGTGCA
AATCTATGGAAGTTTATTGTTAGAAGATCCATTGTGGATGAAAAAGAATTATCTAATCGGACCCAAGACTGCATTGAATTAATGAAGCTCTTGCTGAATGCTAGACTAGA
ACGGATTGTTCTAAATTTGGGGCCCTTTTATCCGCAAATTGTAAGAGAATTTATAGTGAATCTGACTGCCAACTTTTATGATCAAGAGAGTCCTGACTTTCAAAAGCTTT
TGTCTTTTGAATCACGAGATCTTGATGTTCTTTTGAAGAAAGTTCAGGAGCGAAAGGCTGAAGTGGATGAAGTGTTAAGTTTGATGCGGATCACCTTATCCAAGACTGGA
GTGGATTCCTCATCCAGGAGAAACGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAACTAGACAGAGAACCCACACTTTCGATGGCAAGATGAAAGCTAAGCAAAAGCTGATTGTTGAAGATGACGATCCTCCTGCCATGACTAACAAGTACGGTGT
TCGTGTTCGGGGTTTTCTTGTTGCCCAATCTGAGATTAGGGTTCCTCCTCCCTCAGCCAAGAAGAGACGAACTAGAGCCAATCAACCCTCTGAATCCAAAGGGAAAGATA
AGGTAAGTCTATCATCTCTCACATTAACTGATTTGATAGGAACTGGAGTGGAAATTCTTCTAGAAAAGGAGAAATCCTCTTCTAGTAACTCCTCAGGGCACATGCATGAT
TTTGTTGTTCGTCGTAGAAACCCTACTGAAATTATTGAATCGACTGCACTTATTGATGAAGAAGTTAGGTCTTGTGTTGTTGCTATTCCTGTTGTTACTACATCTTGTGT
TGTTGAAAATATTGTTGCTGGTTTGAGTGAGCCAAATATTACTGGTTCTGAAAATATTTTGTTTGAAGAAGAAGGTGTTAAGCCTTTGTCTGAGACATCTGATATGGGAG
ATGTTGAAAGACATGGTGAGGTTTGCGTTGATAAGACTAATGCTTCAACTGAAGCAAAGGCTGTTGAAGGTGAGTTTGCTGGTGATATTGACCAAGGTGTTAGTTGCCAC
TCTACTGAAAATCCTCATAGCCTGCTCAAGATGATAAAAATGATGAAGATAGTGAAAGGCGTCTCTCCTTCACCTGGATCTCCGTTGAAGGAAAAGGAAGATGTTGTGGA
TAGAGTCGAGGCATCTCCTGAGACATCTGATCATGAGTCTGAAGAAAATTTCTCCGAAAAAGAGTCTGATTGGGGTTTTGTTAATAGTTCTGACAATGACAAGTTTGGTC
CAACTCGTGTTACTCAAGTTTCTTCCAAAGGCAAAGATAAACGACCAACTTCCTCCTTTGTTCCCCCAGTGCTACTGGATGGAGTATCCTTTCCCTCTGAGGAGGGTGCA
AATCTATGGAAGTTTATTGTTAGAAGATCCATTGTGGATGAAAAAGAATTATCTAATCGGACCCAAGACTGCATTGAATTAATGAAGCTCTTGCTGAATGCTAGACTAGA
ACGGATTGTTCTAAATTTGGGGCCCTTTTATCCGCAAATTGTAAGAGAATTTATAGTGAATCTGACTGCCAACTTTTATGATCAAGAGAGTCCTGACTTTCAAAAGCTTT
TGTCTTTTGAATCACGAGATCTTGATGTTCTTTTGAAGAAAGTTCAGGAGCGAAAGGCTGAAGTGGATGAAGTGTTAAGTTTGATGCGGATCACCTTATCCAAGACTGGA
GTGGATTCCTCATCCAGGAGAAACGCTTAA
Protein sequenceShow/hide protein sequence
MVRTRQRTHTFDGKMKAKQKLIVEDDDPPAMTNKYGVRVRGFLVAQSEIRVPPPSAKKRRTRANQPSESKGKDKVSLSSLTLTDLIGTGVEILLEKEKSSSSNSSGHMHD
FVVRRRNPTEIIESTALIDEEVRSCVVAIPVVTTSCVVENIVAGLSEPNITGSENILFEEEGVKPLSETSDMGDVERHGEVCVDKTNASTEAKAVEGEFAGDIDQGVSCH
STENPHSLLKMIKMMKIVKGVSPSPGSPLKEKEDVVDRVEASPETSDHESEENFSEKESDWGFVNSSDNDKFGPTRVTQVSSKGKDKRPTSSFVPPVLLDGVSFPSEEGA
NLWKFIVRRSIVDEKELSNRTQDCIELMKLLLNARLERIVLNLGPFYPQIVREFIVNLTANFYDQESPDFQKLLSFESRDLDVLLKKVQERKAEVDEVLSLMRITLSKTG
VDSSSRRNA