| GenBank top hits | e value | %identity | Alignment |
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| KAG6600626.1 DNA-directed RNA polymerases II, IV and V subunit 8B, partial [Cucurbita argyrosperma subsp. sororia] | 3.3e-71 | 91.78 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MA LLF+DIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEG+KILMVLSP+LNYDG+PVT YS Q+GKKSLADKFEYIMHGK+YKL+D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| XP_004149143.1 DNA-directed RNA polymerases II, IV and V subunit 8B isoform X1 [Cucumis sativus] | 9.4e-74 | 95.21 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEGEK+LMVLSP+LNYDGSPVTSY DQEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDPIHCAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| XP_008453774.1 PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Cucumis melo] | 5.2e-72 | 93.15 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSP+LNYDGSPVTSY DQEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDPI+CAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| XP_022929200.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita moschata] | 1.0e-72 | 95.17 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSP+LNYDG+PVTSYS QEGKKSLADKFEYIMHGKIYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDPIHCAKFRVD NMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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| XP_022983196.1 DNA-directed RNA polymerases II, IV and V subunit 8B-like [Cucurbita maxima] | 8.8e-72 | 92.47 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MA +LF+DIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEG+KILMVLSP+LNYDG+PVTSYS QEGKKSLADKFEYIMHGK+YKL+D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQMMLKGDP+HCAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KZC2 Uncharacterized protein | 4.5e-74 | 95.21 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSM+MLLDVNTEIYPIDEGEK+LMVLSP+LNYDGSPVTSY DQEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDPIHCAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| A0A1S3BY97 DNA-directed RNA polymerases II and V subunit 8A-like | 2.5e-72 | 93.15 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSP+LNYDGSPVTSY DQEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDPI+CAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| A0A5A7TNG5 DNA-directed RNA polymerases II and V subunit 8A-like | 2.5e-72 | 93.15 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAGLLFND+FKVKCVNPDGKKYDKVSRI+ARSEKLSM MLLDVNTEIYPIDEGEK+LMVLSP+LNYDGSPVTSY DQEGKKSLADKFEYIMHGK YKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
EGSGSDLKVEVYASFGGLQM+LKGDPI+CAKFRVD NMFLLLRKLT
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKLT
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| A0A6J1ETP8 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 5.0e-73 | 95.17 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSP+LNYDG+PVTSYS QEGKKSLADKFEYIMHGKIYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDPIHCAKFRVD NMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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| A0A6J1J454 DNA-directed RNA polymerases II, IV and V subunit 8B-like | 5.0e-73 | 95.17 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MA LLFND+FKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSP+LNYDG+PVTSYS QEGKKSLADKFEYIMHGKIYKLSD
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
EGSGSDLKVEVYASFGGLQM+LKGDPIHCAKFRVD NMFLLLRKL
Subjt: EGSGSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XT81 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 6.0e-31 | 42.76 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAG++F+D+F VK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K +VL+ +L DG D + + ++EY+M+GK+Y+L D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRK
+ SG+D ++ YASFGGL M LKG+ I+ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRK
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| O81097 DNA-directed RNA polymerases II and V subunit 8A | 1.3e-41 | 56.34 | Show/hide |
Query: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSDEGS
+LF DIF V ++PDGKK+DKV+R++A S L M+M LDVNTE+YP+ G+K + L+P+LN DG+P T Y KK+LADK+EYIMHGK+YK+S E
Subjt: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
G K E+Y SFGGL M+LKGDP H + F +D +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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| P52434 DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 3.9e-30 | 41.89 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGS-PVTSYSDQEGKKSLADKFEYIMHGKIYKLS
MAG+LF DIF VK ++P+GKK+D+VSR+ SE M ++LDVN +IYP+D G+K +V++ +L DG+ Y+ + + S AD+FEY+M+GK+Y++
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGS-PVTSYSDQEGKKSLADKFEYIMHGKIYKLS
Query: DEGSGSD--LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
+ + ++ ++ Y S+GGL M L+GD + F VD ++LL++KL
Subjt: DEGSGSD--LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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| Q19826 Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 | 5.4e-32 | 43.45 | Show/hide |
Query: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
MAG++F+D+FKVK V+PDGKK+D+VSR +E M +++D+N++IYP+ + +K+ +VL+ +L DG D + + ++EY+M+GK+Y+L D
Subjt: MAGLLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSD
Query: EGSGSD-LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRK
+ +G+D K+ YASFGGL M LKG+ I+ F VD N++LL++K
Subjt: EGSGSD-LKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRK
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| Q9M1A8 DNA-directed RNA polymerases II, IV and V subunit 8B | 9.8e-42 | 55.63 | Show/hide |
Query: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSDEGS
++F DIF V ++PDGKK+DKV+R+EARS L M+M LDVNTE+YP+ G+K + ++P+LN DG+P T Y KK+LADK+EYIMHGK+YK+S E
Subjt: LLFNDIFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVLSPSLNYDGSPVTSYSDQEGKKSLADKFEYIMHGKIYKLSDEGS
Query: GSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
G K E+Y SFGGL M+L+GDP H + F +D +FLL+RKL
Subjt: GSDLKVEVYASFGGLQMMLKGDPIHCAKFRVDHNMFLLLRKL
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