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HG10019032 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019032
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:14563763..14564119
RNA-Seq ExpressionHG10019032
SyntenyHG10019032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]3.8e-3372.22Show/hide
Query:  MAKSISTSKNRTFQTSFFSDSEIDVAIQLIHLSEDSDYHDHLTASSTTSSDDKSLPS-------AAMEDDGS-LTSRRRATAPPTSSLIEHIFEEIGDGP
        MAKSIS+ KNR F+TS FSDSEIDVAIQL+HLSEDSDY  +  ASST+ SDDKS+ S       A MEDDGS  +SRR AT  PT+SLIE IFEEIGD  
Subjt:  MAKSISTSKNRTFQTSFFSDSEIDVAIQLIHLSEDSDYHDHLTASSTTSSDDKSLPS-------AAMEDDGS-LTSRRRATAPPTSSLIEHIFEEIGDGP

Query:  NRRGRKRRSRSVYEIYKLTKPVISVK
        NRR RKRRSRSVYEIYKLTKP ISVK
Subjt:  NRRGRKRRSRSVYEIYKLTKPVISVK

KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]2.9e-3371.77Show/hide
Query:  MAKSISTSKNRTFQTSFFSDSEIDVAIQLIHLSEDSDYHDHLTASSTTSSDDKSLPSAA------MEDDGSLTSRRRATAPPTSSLIEHIFEEIGDGPNR
        MA+S+STS+NR FQTS FSDSEIDVAIQLIHLSEDSDYHD L ASST+ SDDKSL SA+      MEDDG    RR     P    IE I+EEIGDG NR
Subjt:  MAKSISTSKNRTFQTSFFSDSEIDVAIQLIHLSEDSDYHDHLTASSTTSSDDKSLPSAA------MEDDGSLTSRRRATAPPTSSLIEHIFEEIGDGPNR

Query:  RGRKRRSRSVYEIYKLTKPVISVK
        R RKRRSRSVYEIYKLTKPVI VK
Subjt:  RGRKRRSRSVYEIYKLTKPVISVK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCAATTTCCACCTCCAAAAATCGAACATTCCAGACTTCCTTCTTCTCCGATTCCGAAATCGACGTCGCAATCCAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACCACCTCACCGCCTCCTCCACCACTTCCAGCGACGACAAATCCCTCCCCTCCGCTGCAATGGAAGACGACGGGAGCCTCACCAGCCGCCGCCGAGCCACTG
CGCCGCCTACATCCTCTCTCATAGAACACATCTTCGAAGAAATTGGAGACGGTCCGAATCGGAGGGGGAGGAAGCGCCGGTCGCGTTCGGTTTACGAGATTTACAAATTG
ACGAAGCCTGTTATCTCCGTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATCAATTTCCACCTCCAAAAATCGAACATTCCAGACTTCCTTCTTCTCCGATTCCGAAATCGACGTCGCAATCCAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACCACCTCACCGCCTCCTCCACCACTTCCAGCGACGACAAATCCCTCCCCTCCGCTGCAATGGAAGACGACGGGAGCCTCACCAGCCGCCGCCGAGCCACTG
CGCCGCCTACATCCTCTCTCATAGAACACATCTTCGAAGAAATTGGAGACGGTCCGAATCGGAGGGGGAGGAAGCGCCGGTCGCGTTCGGTTTACGAGATTTACAAATTG
ACGAAGCCTGTTATCTCCGTGAAATGA
Protein sequenceShow/hide protein sequence
MAKSISTSKNRTFQTSFFSDSEIDVAIQLIHLSEDSDYHDHLTASSTTSSDDKSLPSAAMEDDGSLTSRRRATAPPTSSLIEHIFEEIGDGPNRRGRKRRSRSVYEIYKL
TKPVISVK