; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019048 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019048
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr04:15045607..15056978
RNA-Seq ExpressionHG10019048
SyntenyHG10019048
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142576.2 polygalacturonase [Cucumis sativus]1.3e-7954.69Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL
        MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T STINVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRAL
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL

Query:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------
        GDSGYWILFIKVDGV+FVGG IDGK  A    +   +  P                                                            
Subjt:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------

Query:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP
                                               + IGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Subjt:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP

Query:  ILIDQNYCP
        ILIDQNYCP
Subjt:  ILIDQNYCP

XP_008460791.1 PREDICTED: polygalacturonase-like [Cucumis melo]8.9e-7653.55Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA
        MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT STINVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY A
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LGDSGYWILF KV+GV+F+GGNIDGK  A    +   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PILIDQNYCP
Subjt:  PILIDQNYCP

XP_023531904.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]3.2e-7351.61Show/hide
Query:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA
        MA+ +K+L+LII  F+ FIQ+SSA ++NV+T GAKPDGKTDSTRPFLKAWTSACSS TPSTINVPKGRFLL P TFRGPCKNKITFRLNGTLVAPLDYRA
Subjt:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LG SGYWILFIKV+ V+F GGNID K  +    R   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKE +E+GV+NVTL NAVFTKSDNGVRIK W  P NGFVKHV+FQNI+MNNVKN
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PI+IDQNYCP
Subjt:  PILIDQNYCP

XP_031736043.1 polygalacturonase-like [Cucumis sativus]1.3e-7954.69Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL
        MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T STINVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRAL
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL

Query:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------
        GDSGYWILFIKVDGV+FVGG IDGK  A    +   +  P                                                            
Subjt:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------

Query:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP
                                               + IGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Subjt:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP

Query:  ILIDQNYCP
        ILIDQNYCP
Subjt:  ILIDQNYCP

XP_038876456.1 polygalacturonase-like [Benincasa hispida]8.4e-8255.99Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL
        M SPMKSLV IIFFH FIQ+SSAGSYNV+TLGAKPDGKTDST  F+KAW SACSSLTPS INVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYR L
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL

Query:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------
        G+SGYWILF+KVDGV+F+GGNIDGK       +   +  P                                                            
Subjt:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------

Query:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP
                                               + IGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+FQNIIMNNV+NP
Subjt:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP

Query:  ILIDQNYCP
        ILIDQNYCP
Subjt:  ILIDQNYCP

TrEMBL top hitse value%identityAlignment
A0A0A0M0F3 Uncharacterized protein6.5e-8054.69Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL
        MA+P KSLV I+FFH+FIQIS+A +YNV++ GAKPDGKTDST+ FLKAWTSACSS T STINVPKGRFLLTPITFRGPCKNKITF LNGTLVAPLDYRAL
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRAL

Query:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------
        GDSGYWILFIKVDGV+FVGG IDGK  A    +   +  P                                                            
Subjt:  GDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------

Query:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP
                                               + IGSLGKE NE GVENVTL NAVFTKSDNGVRIK WP PSNGFV+HVIFQNI+M NVKNP
Subjt:  -------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNP

Query:  ILIDQNYCP
        ILIDQNYCP
Subjt:  ILIDQNYCP

A0A1S3CD98 polygalacturonase-like4.3e-7653.55Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA
        MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT STINVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY A
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LGDSGYWILF KV+GV+F+GGNIDGK  A    +   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PILIDQNYCP
Subjt:  PILIDQNYCP

A0A5A7VB33 Polygalacturonase-like4.3e-7653.55Show/hide
Query:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA
        MA+  KSLV I+FFH+FIQISSAGSYNV+T GAKPDGKTDST+ FLKAW SACSSLT STINVPKGRFLLT ITFRGPCK N I F LNGTLVAPLDY A
Subjt:  MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCK-NKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LGDSGYWILF KV+GV+F+GGNIDGK  A    +   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKEVNE GVENVTL NAVFTKSDNGVRIK WP PSNGFVKHV+F+NIIMN+VK+
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PILIDQNYCP
Subjt:  PILIDQNYCP

A0A6J1JKS6 polygalacturonase-like4.5e-7351.29Show/hide
Query:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA
        MA+ +K+L+LII  F+ FIQ+SSA +YNV+T GAKPDGKTDSTRPFLKAWTSAC+S TPSTINVPKGRFLL PITFRGPCKNKITFRLNGTLVAPLD+RA
Subjt:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LG SGYWILFIKV+ V+F GGNID K  +    +   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKE +E+GV+NVTL NAVFTKSDNGVRIK W  P NGFVKHV+F+NIIMNNVKN
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PI+IDQNYCP
Subjt:  PILIDQNYCP

A0A6J1JN08 polygalacturonase-like1.3e-7250.97Show/hide
Query:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA
        MA+ +K+L+LII  F+ FIQ+SSA +YNV+T GAKPDGKTDSTRPFLKAWTSAC+S TPSTINVPKGRFLL PITFRGPCKNKITFRLNGTLVAPLD+RA
Subjt:  MASPMKSLVLII-FFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRA

Query:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------
        LG SGYWILFIKV  V+F GGNID K  +    R   +  P                                                           
Subjt:  LGDSGYWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------

Query:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN
                                                + IGSLGKE +E+GV+NVTL N VFTKSDNGVRIK W  P NGFVKHV+F+NI+MNNVKN
Subjt:  --------------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKN

Query:  PILIDQNYCP
        PI+IDQNYCP
Subjt:  PILIDQNYCP

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438604.1e-3131.23Show/hide
Query:  NVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKN-KITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDG
        NV++ GAKPDG  DST+ FL AW  AC+S  P+TI VPKGRFL+  + F G  CK   I+ R+ G++VAP D+R +  S +WI F  V  V+  GG +D 
Subjt:  NVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKN-KITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVGGNIDG

Query:  KPLAI----------------------------------------------------GLARTLEETVPRE------------------------------
        +  ++                                                    G+  + +E  P                                
Subjt:  KPLAI----------------------------------------------------GLARTLEETVPRE------------------------------

Query:  ----------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYC
                        + IGSLG+   E+GV+NVT++N  F  ++NGVRIK W   SN F ++++FQ+I M  VKNPI+IDQ+YC
Subjt:  ----------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYC

P48979 Polygalacturonase6.7e-4234.74Show/hide
Query:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNK-ITFRLNGTLVAPLDYRALGDSGY
        SL LI  F +   I+S  +YNV +LGAK DGKTDST+ FL AW  AC+S+ P  I VP G F L  + F GPCKN  ITFR+ GTLVAP DYR +G++  
Subjt:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNK-ITFRLNGTLVAPLDYRALGDSGY

Query:  WILFIKVDGVAFVGGNIDGKPLAIGLARTLE-ETVP----------------------------------------------------------------
        WI F  V+GV   GG +DG+  A+   +    E+ P                                                                
Subjt:  WILFIKVDGVAFVGGNIDGKPLAIGLARTLE-ETVP----------------------------------------------------------------

Query:  ---------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID
                                           + IGSLGKE  E GV+NVT+    F+ + NG+RIK+W  PS GF ++++FQ+  M NV+NPI+ID
Subjt:  ---------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID

Query:  QNYCPTIK
        Q+YCP  K
Subjt:  QNYCPTIK

P49062 Exopolygalacturonase clone GBGE1841.2e-2227.02Show/hide
Query:  YNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG-GNIDG
        Y++   GA  DG T++ + FL  W   C S  P+T+ VPKG FL  P+ F GPCK+K+T  + GT++A     A  +   W LF +VD +   G G   G
Subjt:  YNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFIKVDGVAFVG-GNIDG

Query:  KPLAIGLA-------------------------------------------------RTLEETVPRE---------------------------------
        K  A+  A                                                 + ++ T P E                                 
Subjt:  KPLAIGLA-------------------------------------------------RTLEETVPRE---------------------------------

Query:  -----------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNY
                         L +GSLGK  NE+ V  + + N    ++DNG+RIK W          + F+NIIM +VKNPI+IDQNY
Subjt:  -----------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNY

Q39766 Polygalacturonase5.0e-2928.98Show/hide
Query:  VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWIL
        VL++ F    ++       V   GAK DGKTD ++PFL AW  AC+S+TPST+ +PKG +LL+ +   GPCK  I   + GT+ AP D  A  D   W+ 
Subjt:  VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWIL

Query:  FIKVDGVAFVGGNI-------------------------------------------DGKPLAIGLARTLEETVPR------------------------
        F  V+     GG I                                           D K   I +      T+ R                        
Subjt:  FIKVDGVAFVGGNI-------------------------------------------DGKPLAIGLARTLEETVPR------------------------

Query:  ---------------------------------ELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ
                                          + IGSLGK  NE+ VE + ++N   T + NG RIK WP    G V  + F++I MNNV +PILIDQ
Subjt:  ---------------------------------ELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ

Query:  NYCPTIKVVLSRES
         YCP  K   + ES
Subjt:  NYCPTIKVVLSRES

Q39786 Polygalacturonase1.3e-2929.3Show/hide
Query:  VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWIL
        VL++ F    ++ S     V   GAK DGKTD ++PFL AW  AC+S+TPST+ +PKG +LL+ +   GPCK  I   + GT+ AP D  A  D   W+ 
Subjt:  VLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWIL

Query:  FIKVDGVAFVGGNI-------------------------------------------DGKPLAIGLARTLEETVPR------------------------
        F  V+     GG I                                           D K   I +      T+ R                        
Subjt:  FIKVDGVAFVGGNI-------------------------------------------DGKPLAIGLARTLEETVPR------------------------

Query:  ---------------------------------ELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ
                                          + IGSLGK  NE+ VE + ++N   T + NG RIK WP    G V  + F++I MNNV +PILIDQ
Subjt:  ---------------------------------ELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ

Query:  NYCPTIKVVLSRES
         YCP  K   + ES
Subjt:  NYCPTIKVVLSRES

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein5.8e-4937.95Show/hide
Query:  LIIFFHVFIQISSAGS--YNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWI
        LI     FI +SS+ S  +NV++ GAKPDG TDST  FLKAW  AC S   +T+ VP G FLL  ITF GPCK+KITF++ GT+VAP DYR  G+SG WI
Subjt:  LIIFFHVFIQISSAGS--YNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWI

Query:  LFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-------------------------------------------------------------------
        LF KV+  + VGG  D +       R   +  P                                                                   
Subjt:  LFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-------------------------------------------------------------------

Query:  ------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNY
                                        + IGSL K++NE GVENVT++++VFT S NGVRIK+W  PS GFV++V FQN+IM NV+NPI+IDQNY
Subjt:  ------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNY

Query:  CPT
        CP+
Subjt:  CPT

AT1G05660.1 Pectin lyase-like superfamily protein1.5e-4936.84Show/hide
Query:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYW
        SL+  +   + + IS++  +NV++ GAKPDG TDST  FLKAW  AC S + +T+ VPKG FLL  ITF GPCK+KITF++ GT++AP DYR  G+SG+W
Subjt:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYW

Query:  ILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------------
        ILF KV+  + VGG  D +       R   +  P                                                                  
Subjt:  ILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP------------------------------------------------------------------

Query:  -------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQN
                                         + IGSL KE+ E GVENVT++++VFT S NGVRIK+W  PSNGFV+ V FQ+++M NV+NPI+IDQN
Subjt:  -------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQN

Query:  YCPT
        YCPT
Subjt:  YCPT

AT2G43870.1 Pectin lyase-like superfamily protein9.3e-4736.51Show/hide
Query:  LVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKNK-ITFRLNGTLVAPLDYRALGDSGY
        LVL +FF  FI   SA SYNV++ GAKPDGKTD+T+ F+  W +AC+S  P TI VPKGRFLL  +TF G  CK K +TFR++GTLVAP DYR +G+  Y
Subjt:  LVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKNK-ITFRLNGTLVAPLDYRALGDSGY

Query:  WILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------------
        WI F  +DG+   GG +D +  ++   +   +  P                                                                 
Subjt:  WILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP-----------------------------------------------------------------

Query:  --------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ
                                          + IGSLGK+  E GV+NVT+    FT +DNGVRIK+W  PS+GF K++ FQ+ +MNNV+NPI+IDQ
Subjt:  --------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ

Query:  NYCP
        NYCP
Subjt:  NYCP

AT2G43890.1 Pectin lyase-like superfamily protein1.2e-5438.03Show/hide
Query:  VLIIFFHVFIQISS---AGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGY
        VL++FF  F+ + S   A +YNV++ GAKPDG+TDST+ FL AW +AC S    T+ VP+G FLL P+ FRGPC+++ITF++ GT+VAP DYR LG+SGY
Subjt:  VLIIFFHVFIQISS---AGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGY

Query:  WILFIKVDGVAFVGGNID------------GKPLAIG-----------------------------------LARTLEETVPRE----------------
        WILF+KV+ ++ +GG +D            GK   +G                                   + R ++   P +                
Subjt:  WILFIKVDGVAFVGGNID------------GKPLAIG-----------------------------------LARTLEETVPRE----------------

Query:  ----------------------------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ
                                          + IGSLG++ NE GVEN+TL N+VF+ SDNGVRIK W   S GFV++V+FQN+IM NV+NPI++DQ
Subjt:  ----------------------------------LGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQ

Query:  NYCPT
        NYCP+
Subjt:  NYCPT

AT3G59850.1 Pectin lyase-like superfamily protein5.5e-4735.74Show/hide
Query:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKNK-ITFRLNGTLVAPLDYRALGDSG
        SL++++ F + +  SSA +YN+++ GAKPDGKTDST+ F   W  AC+S+ P TI VPKGRFLL  I F G  CK K +TFR+ GTLVAP DYR +G   
Subjt:  SLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRG-PCKNK-ITFRLNGTLVAPLDYRALGDSG

Query:  YWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP----------------------------------------------------------------
        YWILF  +DG++  GG +D +  ++   +   +  P                                                                
Subjt:  YWILFIKVDGVAFVGGNIDGKPLAIGLARTLEETVP----------------------------------------------------------------

Query:  ---------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID
                                           + IGSLGKE  E GV+N+T+  A FT ++NGVRIK+W  PSNGF K++ FQ+ +MNNV+NPI+ID
Subjt:  ---------------------------------RELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILID

Query:  QNYCP
        QNYCP
Subjt:  QNYCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCCCAATGAAGAGCTTAGTCCTCATCATCTTCTTCCATGTGTTCATTCAAATCTCAAGTGCAGGCAGCTACAATGTGATGACTTTGGGTGCCAAACCAGACGG
AAAAACCGACTCGACCCGACCATTTCTCAAGGCATGGACATCGGCGTGTAGCTCCTTGACACCATCCACCATCAACGTCCCTAAGGGAAGGTTCTTGCTTACACCCATCA
CATTTAGAGGTCCATGTAAGAACAAGATTACATTTCGCTTGAATGGAACACTTGTGGCACCTCTTGACTATCGTGCCCTTGGAGATTCTGGGTATTGGATTTTGTTCATC
AAAGTTGATGGAGTTGCTTTCGTCGGTGGCAATATTGATGGAAAGCCACTGGCTATTGGGCTTGCAAGAACTCTGGAAGAAACTGTCCCCCGGGAGCTAGGTATTGGAAG
CTTAGGAAAAGAGGTCAACGAAAAGGGAGTTGAAAATGTAACATTGACGAATGCAGTCTTCACAAAATCCGATAATGGTGTGAGGATAAAGGCATGGCCAGCGCCTAGCA
ATGGTTTCGTAAAACATGTTATCTTTCAGAATATCATTATGAACAATGTTAAAAATCCAATCTTAATTGATCAAAATTATTGTCCAACAATCAAGGTTGTCCTCTCCAGG
GAGAGCACCGATTATCTTCTTCTTAAAAGAGAGAAGCCACGACTAAGCTCAAACTGGTCGGAGAAGGAAAGGACTGAAGGTTTTCTGGTGAGTTTTGACCGGAGAGGAAG
CAGAAATTGGAGGAAAAATCAACCTGGTCTGAAGCAGGAAGAAGCTCGAGCAGTCAGTGGTGTTTGGACGAGTTCACACGGTAGAGTTCGATTTTGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCCCAATGAAGAGCTTAGTCCTCATCATCTTCTTCCATGTGTTCATTCAAATCTCAAGTGCAGGCAGCTACAATGTGATGACTTTGGGTGCCAAACCAGACGG
AAAAACCGACTCGACCCGACCATTTCTCAAGGCATGGACATCGGCGTGTAGCTCCTTGACACCATCCACCATCAACGTCCCTAAGGGAAGGTTCTTGCTTACACCCATCA
CATTTAGAGGTCCATGTAAGAACAAGATTACATTTCGCTTGAATGGAACACTTGTGGCACCTCTTGACTATCGTGCCCTTGGAGATTCTGGGTATTGGATTTTGTTCATC
AAAGTTGATGGAGTTGCTTTCGTCGGTGGCAATATTGATGGAAAGCCACTGGCTATTGGGCTTGCAAGAACTCTGGAAGAAACTGTCCCCCGGGAGCTAGGTATTGGAAG
CTTAGGAAAAGAGGTCAACGAAAAGGGAGTTGAAAATGTAACATTGACGAATGCAGTCTTCACAAAATCCGATAATGGTGTGAGGATAAAGGCATGGCCAGCGCCTAGCA
ATGGTTTCGTAAAACATGTTATCTTTCAGAATATCATTATGAACAATGTTAAAAATCCAATCTTAATTGATCAAAATTATTGTCCAACAATCAAGGTTGTCCTCTCCAGG
GAGAGCACCGATTATCTTCTTCTTAAAAGAGAGAAGCCACGACTAAGCTCAAACTGGTCGGAGAAGGAAAGGACTGAAGGTTTTCTGGTGAGTTTTGACCGGAGAGGAAG
CAGAAATTGGAGGAAAAATCAACCTGGTCTGAAGCAGGAAGAAGCTCGAGCAGTCAGTGGTGTTTGGACGAGTTCACACGGTAGAGTTCGATTTTGGAGCTGA
Protein sequenceShow/hide protein sequence
MASPMKSLVLIIFFHVFIQISSAGSYNVMTLGAKPDGKTDSTRPFLKAWTSACSSLTPSTINVPKGRFLLTPITFRGPCKNKITFRLNGTLVAPLDYRALGDSGYWILFI
KVDGVAFVGGNIDGKPLAIGLARTLEETVPRELGIGSLGKEVNEKGVENVTLTNAVFTKSDNGVRIKAWPAPSNGFVKHVIFQNIIMNNVKNPILIDQNYCPTIKVVLSR
ESTDYLLLKREKPRLSSNWSEKERTEGFLVSFDRRGSRNWRKNQPGLKQEEARAVSGVWTSSHGRVRFWS