; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019060 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019060
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLEA_2 domain-containing protein
Genome locationChr04:15360718..15361314
RNA-Seq ExpressionHG10019060
SyntenyHG10019060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041949.1 Late embryogenesis abundant protein, LEA-14 [Cucumis melo var. makuwa]8.8e-9195.24Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVL
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQ L
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVL

XP_004139805.1 uncharacterized protein LOC101207234 [Cucumis sativus]9.7e-9094.68Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQV VQY+GITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

XP_008447191.1 PREDICTED: uncharacterized protein LOC103489700 [Cucumis melo]3.9e-9195.74Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

XP_022971998.1 uncharacterized protein LOC111470648 [Cucurbita maxima]1.6e-8491.49Show/hide
Query:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        M SSR A +   P Y PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVG+QYM IT PNPT ASLSLNIRMIFTAVNPNKVG
Subjt:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKYGESRFTVMYRGIPLGRAS+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLLSF+SPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

XP_038887420.1 uncharacterized protein LOC120077562 [Benincasa hispida]4.5e-9598.4Show/hide
Query:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        MSSSR APNG+HPRYNPRSSSSASFKGCCCCLFLLFSFLALLILA+VLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

TrEMBL top hitse value%identityAlignment
A0A0A0K5H7 LEA_2 domain-containing protein4.7e-9094.68Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQV VQY+GITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

A0A1S3BGU8 uncharacterized protein LOC1034897001.9e-9195.74Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

A0A5D3D361 Late embryogenesis abundant protein, LEA-144.2e-9195.24Show/hide
Query:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        SSSR  PNG+HPRYNPR SSSSA+FKGCCCCLFLLFSFLALL+LA+VLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
Subjt:  SSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVL
        IKY ESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQ L
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVL

A0A6J1GKY5 uncharacterized protein LOC1114552784.7e-8289.95Show/hide
Query:  MSSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKV
        M  SR A     P Y PR SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVG+QYM IT PNPT ASLSL+IRMIFTAVNPNKV
Subjt:  MSSSRAAPNGLHPRYNPR-SSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKV

Query:  GIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        GIKYGESRFTVMYRGIPLGRAS+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLLSF+SPGVQV
Subjt:  GIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

A0A6J1I8L5 uncharacterized protein LOC1114706487.8e-8591.49Show/hide
Query:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG
        M SSR A +   P Y PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVG+QYM IT PNPT ASLSLNIRMIFTAVNPNKVG
Subjt:  MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVG

Query:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        IKYGESRFTVMYRGIPLGRAS+PGFFQDPHSQRQVDATIAVDRV+LLQADAADLIRDASLNDRVELRILGDVAAKIRLLSF+SPGVQV
Subjt:  IKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family3.2e-0623.98Show/hide
Query:  NGLHPRYNPRSS--SSASFKGCC--CCLFLLFSFLALLIL--AVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNK-VGI
        N   P Y P +    ++  +GCC  CC + +F  + LL++  A   VV L  +P++P F + ++ +  +  T+    T ++SL++     A NPNK VG 
Subjt:  NGLHPRYNPRSS--SSASFKGCC--CCLFLLFSFLALLIL--AVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNK-VGI

Query:  KYGESRFTVMYRG-------IPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSP--GVQV
         Y  +  T +Y+        + +G+ ++  F     +   + +TI      L +  A  L  D      V ++I+ +   K+++ +  +P  G++V
Subjt:  KYGESRFTVMYRG-------IPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSP--GVQV

AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.4e-7272.36Show/hide
Query:  SSSRAAPNG-------LHPRYNP-RSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNP----NPTTASLSLNIRM
        SSSRA  NG         P Y    SSSSAS KGCCCCLFLLF+FLALL+LAVVL+V+LA+KPKKPQFDLQQV V YMGI+NP    +PTTASLSL IRM
Subjt:  SSSRAAPNG-------LHPRYNP-RSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNP----NPTTASLSLNIRM

Query:  IFTAVNPNKVGIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV
        +FTAVNPNKVGI+YGES FTVMY+G+PLGRA+VPGF+QD HS + V+ATI+VDRVNL+QA AADL+RDASLNDRVEL + GDV AKIR+++F+SPGVQV
Subjt:  IFTAVNPNKVGIKYGESRFTVMYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQV

AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.7e-0529.9Show/hide
Query:  CCLFLLFSFLALLILAVVLVVV--LALKPKKPQFDLQQVGV-QYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRASVP
        C + + F+ L +L++A+V+V++     KPK+P   +  V V +     NP      L+L + +  +  NPN++G  Y  S   + YRG  +G A +P
Subjt:  CCLFLLFSFLALLILAVVLVVV--LALKPKKPQFDLQQVGV-QYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTVMYRGIPLGRASVP

AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.6e-0525.62Show/hide
Query:  PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPN-KVGIKYGESRFTVMYRGI
        PRSS ++ +  C      +FS L +      L+V LA++P+ P FD+    +  +    P      LS    M+    NPN K+ +K+ + R  + +   
Subjt:  PRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPN-KVGIKYGESRFTVMYRGI

Query:  PLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK
         +    V  F Q  H  R     +    V L    A +L R    N+++E  I G    K
Subjt:  PLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAK

AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.7e-0426.92Show/hide
Query:  LFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPN-KVGIKYGESRFTVMYRGIPL-GRASVPGFFQDP
        LF  FS     +L ++ +V L L P++P+F L +  +  + +T    +T  L+ ++++   + NPN KVGI Y +      YRG  +   AS+P F+Q  
Subjt:  LFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPN-KVGIKYGESRFTVMYRGIPL-GRASVPGFFQDP

Query:  HSQRQVDATIAVDRVNLLQADAADLIRDAS
             + A +    + + Q+    + R+ S
Subjt:  HSQRQVDATIAVDRVNLLQADAADLIRDAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTCAAGAGCTGCCCCAAACGGCCTCCACCCTCGCTACAACCCCAGATCCTCCTCCTCCGCCTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCTCCTCTTCTC
CTTTCTCGCCCTCTTAATCCTCGCCGTCGTCCTCGTCGTCGTTCTCGCCCTTAAACCCAAGAAACCCCAGTTCGATCTCCAGCAGGTCGGCGTCCAATACATGGGCATAA
CCAATCCCAATCCCACCACCGCCTCTCTCTCCCTCAACATTCGGATGATTTTCACTGCCGTTAACCCTAACAAAGTCGGAATCAAGTACGGCGAGTCTCGGTTCACGGTC
ATGTACCGAGGAATTCCTCTCGGGAGAGCCTCTGTTCCGGGATTCTTTCAAGACCCCCATAGCCAGCGCCAGGTCGACGCCACCATCGCCGTCGATCGCGTTAACCTCCT
CCAGGCTGACGCCGCCGATTTGATCCGTGACGCTTCCTTGAACGACCGTGTCGAGCTTAGAATACTCGGCGATGTTGCCGCTAAGATCCGCCTCTTGTCCTTCAATTCCC
CCGGCGTTCAGGTACTACTCTCTCTCTCTACTTCGCCTCTGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTCAAGAGCTGCCCCAAACGGCCTCCACCCTCGCTACAACCCCAGATCCTCCTCCTCCGCCTCCTTCAAAGGCTGCTGCTGCTGCCTCTTCCTCCTCTTCTC
CTTTCTCGCCCTCTTAATCCTCGCCGTCGTCCTCGTCGTCGTTCTCGCCCTTAAACCCAAGAAACCCCAGTTCGATCTCCAGCAGGTCGGCGTCCAATACATGGGCATAA
CCAATCCCAATCCCACCACCGCCTCTCTCTCCCTCAACATTCGGATGATTTTCACTGCCGTTAACCCTAACAAAGTCGGAATCAAGTACGGCGAGTCTCGGTTCACGGTC
ATGTACCGAGGAATTCCTCTCGGGAGAGCCTCTGTTCCGGGATTCTTTCAAGACCCCCATAGCCAGCGCCAGGTCGACGCCACCATCGCCGTCGATCGCGTTAACCTCCT
CCAGGCTGACGCCGCCGATTTGATCCGTGACGCTTCCTTGAACGACCGTGTCGAGCTTAGAATACTCGGCGATGTTGCCGCTAAGATCCGCCTCTTGTCCTTCAATTCCC
CCGGCGTTCAGGTACTACTCTCTCTCTCTACTTCGCCTCTGCTTTAG
Protein sequenceShow/hide protein sequence
MSSSRAAPNGLHPRYNPRSSSSASFKGCCCCLFLLFSFLALLILAVVLVVVLALKPKKPQFDLQQVGVQYMGITNPNPTTASLSLNIRMIFTAVNPNKVGIKYGESRFTV
MYRGIPLGRASVPGFFQDPHSQRQVDATIAVDRVNLLQADAADLIRDASLNDRVELRILGDVAAKIRLLSFNSPGVQVLLSLSTSPLL