CuGenDBv2

Gene ID	HG10019078
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	general transcription factor 3C polypeptide 5-like
Genome location	Chr04:15943102..15949956
RNA-Seq Expression	HG10019078
Synteny	HG10019078
Gene Ontology terms	GO:0006384 - transcription initiation from RNA polymerase III promoter (biological process) GO:0015074 - DNA integration (biological process) GO:0000127 - transcription factor TFIIIC complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR019136 - Transcription factor IIIC subunit 5, HTH domain IPR040454 - Transcription factor IIIC subunit Tfc1/Sfc1

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004142476.1 general transcription factor 3C polypeptide 5 isoform X2 [Cucumis sativus]

1.1e-120

85.45

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRS CNSNASN+LCY HA ISAFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL
         C+YESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKLKR DRKDC+KVDQ  EHEANA   +DDKLDA+YAEED EEDG+GVESG+EAL
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL

Query:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        DAYDDF+MVGDDDE SL SHSYL M+DVSRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSD+D
Subjt:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

XP_008465056.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo]

3.9e-121

84.95

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRS CNS+AS+KLCY HA I AFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG
        SC+YESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKLKREDRKDC+KVDQ  EHEANA VI+DDKL DA+YAEED   +EEDGLGVESG
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG

Query:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        +EALDAYDDF+MVGDDDE SLQSHSYL+M+D+SRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSDDD
Subjt:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

XP_008465058.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X2 [Cucumis melo]

3.9e-121

84.95

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRS CNS+AS+KLCY HA I AFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG
        SC+YESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKLKREDRKDC+KVDQ  EHEANA VI+DDKL DA+YAEED   +EEDGLGVESG
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG

Query:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        +EALDAYDDF+MVGDDDE SLQSHSYL+M+D+SRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSDDD
Subjt:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

XP_011655959.1 general transcription factor 3C polypeptide 5 isoform X1 [Cucumis sativus]

5.1e-121

86.23

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRS CNSNASN+LCY HA ISAFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVIN-DDKLDANYAEEDEEEDGLGVESGDEA
         C+YESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKLKR DRKDC+KVDQ  EHEANAAV N DDKLDA+YAEED EEDG+GVESG+EA
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVIN-DDKLDANYAEEDEEEDGLGVESGDEA

Query:  LDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        LDAYDDF+MVGDDDE SL SHSYL M+DVSRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSD+D
Subjt:  LDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

XP_038888323.1 transcription factor tau subunit sfc1-like [Benincasa hispida]

6.8e-134

91.73

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD DSRIYQRIDFRVPASLRS CNSNASNKLCY HAEISAFQVFPHKFQTSLQLFELEDEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEE--EDGLGVESGDE
        SC+YESGWFSLRI+NCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRK+C+KVDQGGEHE NAAVINDDKL+ANYAEEDEE  EDGLGVESGDE
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEE--EDGLGVESGDE

Query:  ALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEKMDDGDGSEDEYQIYEQDTDMDSDDDQS
        ALDAYD+FDMVGDDDEISLQSHSYLNM++VSRTHLQELF SF    EDG KMDDGDGSE+EYQIYEQDTDMDSDDD S
Subjt:  ALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEKMDDGDGSEDEYQIYEQDTDMDSDDDQS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV91 Uncharacterized protein

5.5e-121

85.45

Show/hide

Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +S+IYQRIDFRVP SLRS CNSNASN+LCY HA ISAFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL
         C+YESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALL AASESFEKLKR DRKDC+KVDQ  EHEANA   +DDKLDA+YAEED EEDG+GVESG+EAL
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL

Query:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        DAYDDF+MVGDDDE SL SHSYL M+DVSRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSD+D
Subjt:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

A0A1S3CMW8 general transcription factor 3C polypeptide 5-like isoform X2

1.9e-121

84.95

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRS CNS+AS+KLCY HA I AFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG
        SC+YESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKLKREDRKDC+KVDQ  EHEANA VI+DDKL DA+YAEED   +EEDGLGVESG
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG

Query:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        +EALDAYDDF+MVGDDDE SLQSHSYL+M+D+SRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSDDD
Subjt:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

A0A1S4E516 general transcription factor 3C polypeptide 5-like isoform X1

1.9e-121

84.95

Show/hide

Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRS CNS+AS+KLCY HA I AFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG
        SC+YESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKLKREDRKDC+KVDQ  EHEANA VI+DDKL DA+YAEED   +EEDGLGVESG
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKL-DANYAEED---EEEDGLGVESG

Query:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        +EALDAYDDF+MVGDDDE SLQSHSYL+M+D+SRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSDDD
Subjt:  DEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

A0A5A7VAR4 Ty3/gypsy retrotransposon protein

1.6e-120

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD +SRIYQRIDFRVP SLRS CNS+AS+KLCY HA I AFQVFP KFQTSLQLFEL+DEYIQE+IRKPSEEA
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAA-VINDDKL-DANYAEED---EEEDGLGVES
        SC+YESGWFS+R LNCIRQRIMMRFLSVFPTAGAEALL AASE+FEKLKREDRKDC+KVDQ  EHEANAA VI+DDKL DA+YAEED   +EEDGLGVES
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAA-VINDDKL-DANYAEED---EEEDGLGVES

Query:  GDEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD
        G+EALDAYDDF+MVGDDDE SLQSHSYL+M+D+SRTHLQELF SF    EDGEK MDDGDGS++EYQIYEQDTDMDSDDD
Subjt:  GDEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEK-MDDGDGSEDEYQIYEQDTDMDSDDD

A0A6J1JKL2 general transcription factor 3C polypeptide 5-like

4.8e-117

81.52

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        RLLSRIAYYFSSGPFQRFWIKKGYDPRKD DSR YQRIDFRVP SLRS CNSNAS+++ Y H +I AFQVFPHKFQTSLQLFELEDEYIQE+I+KPSEE 
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL
        SC+YESGWFSLRILNC+RQRIMMRFL VFPTA AE LLRAASE+FEKLKR+ +K C KVD GG+H+ANAAVINDDKL+ N  EED  EDGL VESGDEAL
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEAL

Query:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEKMDDGDGSEDEYQIYEQDTDMDSDDDQS
        D YD+F+MVGDDDEISLQSHSYLNMDDVSRTHLQELF SF    ED +K+DDGDGSE+EYQIYEQD+D+DSDDD S
Subjt:  DAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSF----EDGEKMDDGDGSEDEYQIYEQDTDMDSDDDQS

SwissProt top hits

e value

%identity

Alignment

Q54GS8 General transcription factor 3C polypeptide 5

2.1e-05

38.1

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRV-------PASLRSSCNSNASN
        R+L  +A+ F  GP+++ W+K G+DPR  P++  YQ IDFR+       P++  S  N+N +N
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRV-------PASLRSSCNSNASN

Q8R2T8 General transcription factor 3C polypeptide 5

1.3e-07

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Query:  LLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR
        LL  +AYY  +GP++  WI+ GYDPRK PD++IYQ +DFR+   ++
Subjt:  LLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR

Q9Y5Q8 General transcription factor 3C polypeptide 5

4.6e-08

52.17

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Query:  LLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR
        LL  IAYY  +GP++  WI+ GYDPRK+PD++IYQ +DFR+   ++
Subjt:  LLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLR

Arabidopsis top hits

e value

%identity

Alignment

AT3G49410.1 Transcription factor IIIC, subunit 5

1.8e-55

44.44

Show/hide

Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        R L R AYYFSSGPF RFWIK+GYDPR DP+SR+YQR++FRVP  LR  C++NA+N       +I AF++FP K QT LQLFEL+DEYIQ +IRKP ++ 
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKR-EDRKDCTK--------VDQGGEHEANAAVINDDKLDANYAEEDEEEDGL
        +C+++SGWFS  +L+ +R R+ +RF+SVFP  G E + ++  E FE+ ++ + +K+  K          +G E       +N++ +DAN  E+ E+E+  
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKR-EDRKDCTK--------VDQGGEHEANAAVINDDKLDANYAEEDEEEDGL

Query:  GVESGDEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSFEDGEKMDDG-----DGSEDEYQIYEQDTD--MDSDDDQS
         ++  DE  +  ++ DM   D+EISL SH YL+ ++ SRT+LQ LF SF   E    G     DGS+ E+QIYE++++     DDD +
Subjt:  GVESGDEALDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSFEDGEKMDDG-----DGSEDEYQIYEQDTD--MDSDDDQS

AT5G24450.1 Transcription factor IIIC, subunit 5

3.3e-54

44.6

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Query:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA
        R L R AYYFS GPF RFWIK+GYDPRKDP+SR++QR++FRVP  L+  C+SNA+NK      +I AF+VFP K QT LQLFEL+DEYIQ++IRKP ++ 
Subjt:  RLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEA

Query:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKL-KREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEA
        +C Y++GWFS  +L+ +R R+ +RF+SVFP  G E + ++  E FE+  K   +KD  +  Q    E       D K   N  +E +++    V + +++
Subjt:  SCTYESGWFSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKL-KREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEA

Query:  LDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSFED------GEKMDDGDGSEDEYQIYEQDTDMDSDDDQ
         D  D+++   +DD+IS+ SH Y +M++ SRT+LQ LF  F        G   DD D S+ EY IYEQ+++   DD++
Subjt:  LDAYDDFDMVGDDDEISLQSHSYLNMDDVSRTHLQELFVSFED------GEKMDDGDGSEDEYQIYEQDTDMDSDDDQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGCAGGCTTCTTTCTAGAATTGCATATTACTTTTCCAGTGGACCTTTCCAAAGATTTTGGATAAAAAAAGGTTACGATCCTCGAAAAGATCCTGATTCTCGCATATA
CCAACGAATTGATTTTCGAGTTCCTGCGTCATTACGAAGTTCTTGCAATTCCAATGCTTCCAACAAGTTGTGTTACAGACATGCAGAGATAAGTGCATTTCAAGTTTTTC
CTCACAAGTTCCAAACATCATTGCAACTTTTTGAACTTGAAGATGAGTATATTCAAGAACAGATAAGAAAACCCTCCGAGGAAGCATCGTGTACGTATGAATCTGGATGG
TTTTCTCTGCGTATCCTAAATTGCATCCGACAACGAATCATGATGAGGTTTTTATCAGTATTCCCAACGGCAGGTGCTGAAGCTTTACTCAGAGCAGCCTCTGAAAGCTT
TGAAAAATTGAAGAGGGAGGATAGAAAAGACTGCACAAAGGTCGACCAGGGAGGGGAACATGAAGCCAATGCAGCTGTGATCAATGATGACAAACTGGATGCTAATTACG
CCGAAGAAGATGAAGAAGAAGATGGCCTAGGTGTTGAGAGTGGTGATGAGGCATTAGATGCATATGACGATTTCGATATGGTTGGTGACGATGACGAGATCTCTCTGCAG
TCACATTCATATTTAAACATGGACGATGTTTCAAGAACACATTTGCAAGAATTGTTTGTTAGCTTTGAAGATGGAGAGAAGATGGACGATGGAGATGGCAGTGAGGATGA
GTATCAAATATATGAGCAAGATACTGATATGGACTCTGACGATGATCAATCATAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MCRLLSRIAYYFSSGPFQRFWIKKGYDPRKDPDSRIYQRIDFRVPASLRSSCNSNASNKLCYRHAEISAFQVFPHKFQTSLQLFELEDEYIQEQIRKPSEEASCTYESGW
FSLRILNCIRQRIMMRFLSVFPTAGAEALLRAASESFEKLKREDRKDCTKVDQGGEHEANAAVINDDKLDANYAEEDEEEDGLGVESGDEALDAYDDFDMVGDDDEISLQ
SHSYLNMDDVSRTHLQELFVSFEDGEKMDDGDGSEDEYQIYEQDTDMDSDDDQS

HG10019078 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome