; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019090 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019090
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionribosome production factor 1-like
Genome locationChr04:16361577..16364398
RNA-Seq ExpressionHG10019090
SyntenyHG10019090
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]8.1e-15788.86Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVG                                 RYIFESKENKKEADSKKKSKDTKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]1.8e-14884.98Show/hide
Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVG                                 RYIF+SKENKKEADSK  SKD KGEKVPQQ+VIARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]1.8e-14884.98Show/hide
Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVG                                 RYIF+SKENKKEADSK  SKD KGEKVP+Q+VIARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]1.9e-15386.75Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVG                                 RYIFESKENKKEADSKKKSK TKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]4.0e-15687.95Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEE KN+GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
        SHQPELVLTNFTTRLGLR+G                                 RYIFESKENKKEADSKKKSKDTKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein9.1e-15486.75Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNK I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVG                                 RYIFESKENKKEADSKKKSK TKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X13.9e-15788.86Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVG                                 RYIFESKENKKEADSKKKSKDTKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X13.9e-15788.86Show/hide
Query:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKNKGIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLRVG                                 RYIFESKENKKEADSKKKSKDTKGEKVPQQ+VIARLQECGPRFTMKL
Subjt:  SHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like8.8e-14984.98Show/hide
Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVG                                 RYIF+SKENKKEADSK  SKD KGEKVP+Q+VIARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like8.8e-14984.98Show/hide
Query:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKNK-GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK
        TSH+PELVLTNFTTRLGLRVG                                 RYIF+SKENKKEADSK  SKD KGEKVPQQ+VIARLQECGPRFTMK
Subjt:  TSHQPELVLTNFTTRLGLRVG---------------------------------RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 11.0e-5344.22Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRYIFES--KENKKEADSKKKSKDTKGEKV--PQQRVIAR------LQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRR
        L NFTTRLG  +GR +F S    N +    +  +   + + +     R I R      +QE GPRFT+KL SLQ GTFDSK GEYEWVHKP EMDTSRR+
Subjt:  LTNFTTRLGLRVGRYIFES--KENKKEADSKKKSKDTKGEKV--PQQRVIAR------LQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRR

Query:  FFL
        F L
Subjt:  FFL

Q6IQU6 Ribosome production factor 17.4e-5243.09Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRF

Query:  NSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELVLTNF

Query:  TTRLGLRVGR-----YIFESKENKKEADSKKKSKD----------TKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHK-PEMDTSRR
        TTRLG  +GR     +  + +   ++  +    +D           K EK         +QE GPRFT+KL SLQ GTFDSK GEYEWVHK  EMD+SRR
Subjt:  TTRLGLRVGR-----YIFESKENKKEADSKKKSKD----------TKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHK-PEMDTSRR

Query:  RFFL
        +F L
Subjt:  RFFL

Q7TND5 Ribosome production factor 16.7e-5342.05Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRYIFESKENKKEADSKKKSKDTKGEK---------VPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRRF
        L NFTTRLG  +GR       +  +   ++ +                + +      +QE GPRFT+KL SLQ GTFDSK GEYEWVHKP EMDTSRR+F
Subjt:  LTNFTTRLGLRVGRYIFESKENKKEADSKKKSKDTKGEK---------VPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRRF

Query:  FL
         L
Subjt:  FL

Q8AVP1 Ribosome production factor 11.3e-5343.83Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGR-----YIFESKENKKEADSKKKSKD----------TKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHK-PEMD
        L NFTTRLG  +GR     Y  +     ++  +    +D           K EK         +QE GPRFT+KL SLQ GTFDSK GEYEWVHK  EMD
Subjt:  LTNFTTRLGLRVGR-----YIFESKENKKEADSKKKSKD----------TKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHK-PEMD

Query:  TSRRRFFL
        TSRR+F L
Subjt:  TSRRRFFL

Q9H9Y2 Ribosome production factor 12.3e-5343.89Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHQPELV

Query:  LTNFTTRLGLRVGRYIFES--KENKKEADSKKKSKDTKGEKV--PQQRVIAR------LQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRR
        L NFTTRLG  +GR +F S    N +    +  +   + + +     R I R      +QE GPRFT+KL SLQ GTFDSK GEYEWVHKP EMDTSRR+
Subjt:  LTNFTTRLGLRVGRYIFES--KENKKEADSKKKSKDTKGEKV--PQQRVIAR------LQECGPRFTMKLISLQHGTFDSKGGEYEWVHKP-EMDTSRRR

Query:  FFL
        F L
Subjt:  FFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein6.2e-3033.58Show/hide
Query:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEY
        ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE 
Subjt:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEY

Query:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVG---RYIFESKE----------NKK
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG   ++IF + +          N+ 
Subjt:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTSHQPELVLTNFTTRLGLRVG---RYIFESKE----------NKK

Query:  EADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        +  S +     KGE  P+      L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  EADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein1.2e-11366.35Show/hide
Query:  GEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI
        G EK+N  I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R+I
Subjt:  GEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI

Query:  LPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS
         PKVL+TTCRFNST GP  ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPTS
Subjt:  LPKVLITTCRFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTS

Query:  HQPELVLTNFTTRLGLRVGRYI---------FESK-----ENKKEADSKK------KSKDTKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGE
        HQPELVL NFTTRLG RVGR+          F  +      N+++    +      ++K++K +K  ++ +  RLQECGPRFT+KL++LQHGTFD+KGGE
Subjt:  HQPELVLTNFTTRLGLRVGRYI---------FESK-----ENKKEADSKK------KSKDTKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGE

Query:  YEWVHKPEMDTSRRRFFL
        +EWVHKPEMDTSRRRFFL
Subjt:  YEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGGAGAAGAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAATCTCAAGAACCAGAAGAAGCTTGAGAAACG
CAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACTATTGGACCTGATTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATGATTTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTAGATGGCCTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TATCGAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTGTATTGACCAATTTCACAACACGCCTCGGTCTTCGTGTTGGA
AGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAAGAAGTCCAAGGATACGAAGGGTGAGAAAGTTCCTCAGCAGAGAGTAATTGCCCGTCTTCA
GGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAACATGGAACTTTCGACTCAAAAGGCGGGGAGTATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCC
GCAGAAGATTTTTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGGAGAAGAAGAACAAGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCCAATCTCAAGAACCAGAAGAAGCTTGAGAAACG
CAAGAGGGCCAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACTATTGGACCTGATTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATGATTTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTAGATGGCCTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TATCGAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCAGTCATCAGCCAGAGCTTGTATTGACCAATTTCACAACACGCCTCGGTCTTCGTGTTGGA
AGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCCGACTCAAAAAAGAAGTCCAAGGATACGAAGGGTGAGAAAGTTCCTCAGCAGAGAGTAATTGCCCGTCTTCA
GGAATGTGGTCCTCGTTTCACAATGAAATTGATCAGTTTGCAACATGGAACTTTCGACTCAAAAGGCGGGGAGTATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCC
GCAGAAGATTTTTCTTGTGA
Protein sequenceShow/hide protein sequence
MGEEKKNKGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTC
RFNSTIGPDFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRVG
RYIFESKENKKEADSKKKSKDTKGEKVPQQRVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL