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HG10019091 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019091
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L7
Genome locationChr04:16417436..16421407
RNA-Seq ExpressionHG10019091
SyntenyHG10019091
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily
IPR039699 - Ribosomal protein L7/L30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038503.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa]6.1e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

KAA0062531.1 60S ribosomal protein L7-1 [Cucumis melo var. makuwa]6.1e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

XP_022154206.1 60S ribosomal protein L7-1-like [Momordica charantia]4.6e-2182.54Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        MED+VH+IA VGPHFKEVI FLWP ELDKP GGG LQGKK+LYK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

XP_031739353.1 60S ribosomal protein L7-1 [Cucumis sativus]4.6e-2185.71Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        MEDMVHEIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YKEGGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

XP_038886994.1 60S ribosomal protein L7-1-like [Benincasa hispida]6.1e-2184.13Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        MEDMVHEIA VGPHFKEVI FLWP EL+KP GGG LQGKKSLYK+GGD GNR DDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

TrEMBL top hitse value%identityAlignment
A0A1S3CPC0 60S ribosomal protein L7-12.9e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

A0A5A7VA58 60S ribosomal protein L7-12.9e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

A0A5D3E4T2 60S ribosomal protein L7-12.9e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

A0A5D3E729 60S ribosomal protein L7-12.9e-2180.95Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +EDMV+EIA VGPHFKEVI FLWP EL+KP GGG LQGKKS YK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

A0A6J1DN17 60S ribosomal protein L7-1-like2.3e-2182.54Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        MED+VH+IA VGPHFKEVI FLWP ELDKP GGG LQGKK+LYK+GGD GNREDDINDLINE+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

SwissProt top hitse value%identityAlignment
O01802 60S ribosomal protein L72.8e-1353.73Show/hide
Query:  NYNIMEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        N   +ED+ HEIATVGPHFKE   FLWP +L+ P GG +   K + + EGGD GNRED IN+L+ ++
Subjt:  NYNIMEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

P0DJ13 60S ribosomal protein L72.8e-1358.33Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI
        +ED++HEI TVGPHFKE   FLWP +LD P GG   + K+  Y +GGD GNRE  INDL+
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLI

P60039 60S ribosomal protein L7-34.8e-1355.56Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

P60040 60S ribosomal protein L7-24.8e-1358.06Show/hide
Query:  EDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        ED++HEI TVGPHFKE   FLWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+LI  +
Subjt:  EDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

Q9LHP1 60S ribosomal protein L7-48.3e-1353.97Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

Arabidopsis top hitse value%identityAlignment
AT2G01250.1 Ribosomal protein L30/L7 family protein3.4e-1458.06Show/hide
Query:  EDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        ED++HEI TVGPHFKE   FLWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+LI  +
Subjt:  EDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

AT2G44120.1 Ribosomal protein L30/L7 family protein3.4e-1455.56Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

AT2G44120.2 Ribosomal protein L30/L7 family protein3.4e-1455.56Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  L+ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

AT3G13580.2 Ribosomal protein L30/L7 family protein5.9e-1453.97Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV

AT3G13580.3 Ribosomal protein L30/L7 family protein5.9e-1453.97Show/hide
Query:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV
        +ED++HEI TVGPHFKE   FLWP +L  P GG  ++ K++ Y EGGD GNRE+ IN+L+  +
Subjt:  MEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGGAAAAACGATCTTAACTACAACATCATGGAGGATATGGTGCATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGA
ACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTATACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGG
TGCCATTTAGACATGAACTAAGACTGGGGAAGTCCATAAGAAGGGTTCAATCCAAAGCATTGACCCGTCGGGGCCTTGAAAGACCAGTTCTTCCCTCTACGACAAAAGAA
GAATTGTCAACAAAAGAAGAAGCAGATCAGAGAGCAAGATTCGTTGAAAGAAAAAGTGATCCGGACTTTTGCTATCTCTCACTACCTCCGTCACTAGAAAATTGGAAGTC
AGAAACCGCCCTCTACCATTTCAAATGTGAAACGGTGCTAAAGCAGGACCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGGAAAAACGATCTTAACTACAACATCATGGAGGATATGGTGCATGAAATTGCTACTGTTGGTCCTCATTTTAAGGAGGTAATTTACTTTTTATGGCCTGTTGA
ACTTGACAAGCCAGAAGGAGGAGGGAGCCTTCAAGGGAAAAAGTCATTATACAAGGAGGGTGGAGATGTTGGTAATAGAGAGGATGATATCAATGATCTGATTAATGAGG
TGCCATTTAGACATGAACTAAGACTGGGGAAGTCCATAAGAAGGGTTCAATCCAAAGCATTGACCCGTCGGGGCCTTGAAAGACCAGTTCTTCCCTCTACGACAAAAGAA
GAATTGTCAACAAAAGAAGAAGCAGATCAGAGAGCAAGATTCGTTGAAAGAAAAAGTGATCCGGACTTTTGCTATCTCTCACTACCTCCGTCACTAGAAAATTGGAAGTC
AGAAACCGCCCTCTACCATTTCAAATGTGAAACGGTGCTAAAGCAGGACCCGTGA
Protein sequenceShow/hide protein sequence
MYWKNDLNYNIMEDMVHEIATVGPHFKEVIYFLWPVELDKPEGGGSLQGKKSLYKEGGDVGNREDDINDLINEVPFRHELRLGKSIRRVQSKALTRRGLERPVLPSTTKE
ELSTKEEADQRARFVERKSDPDFCYLSLPPSLENWKSETALYHFKCETVLKQDP