; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019097 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019097
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionABC transporter D family member 1
Genome locationChr04:16633277..16635341
RNA-Seq ExpressionHG10019097
SyntenyHG10019097
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045345.1 ABC transporter D family member 1 [Cucumis melo var. makuwa]6.2e-4488.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+  ERSTNLAT+GGRIKK TQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        KKGA DLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

XP_008455618.1 PREDICTED: ABC transporter D family member 1 [Cucumis melo]6.2e-4488.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+  ERSTNLAT+GGRIKK TQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        KKGA DLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

XP_011653357.1 ABC transporter D family member 1 [Cucumis sativus]4.3e-4590.52Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRH+ILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+N ERSTNLATEGGRIKKSTQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
         KGARDLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

XP_022136439.1 ABC transporter D family member 1 [Momordica charantia]4.0e-4388.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRH+ILASRRKTLLFATGVVLVGGTAAYL+SR  NKKSSSF+HYNGLDSN ERS NLATEG  IKKSTQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        K+GARDLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

XP_038903874.1 ABC transporter D family member 1 [Benincasa hispida]2.3e-4691.3Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSRGNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMGK
        MPSLQLLHLTKHRH+ILASRRKTLLFA+GVVLVGGTAAYLRSR NKKSSSFNHYNGLDSN ERSTNL TEGGRIKKSTQKS GLKSLHALAAILLSKMGK
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSRGNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMGK

Query:  KGARDLLSLLGIVTM
         GA+DLLSLLGIV +
Subjt:  KGARDLLSLLGIVTM

TrEMBL top hitse value%identityAlignment
A0A0A0KXT1 Uncharacterized protein2.1e-4590.52Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRH+ILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+N ERSTNLATEGGRIKKSTQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
         KGARDLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

A0A1S4E1B7 ABC transporter D family member 13.0e-4488.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+  ERSTNLAT+GGRIKK TQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        KKGA DLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

A0A5A7TVC9 ABC transporter D family member 13.0e-4488.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+  ERSTNLAT+GGRIKK TQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        KKGA DLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

A0A5D3BAQ9 ABC transporter D family member 13.0e-4488.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR  N+KS SFNHYNGLD+  ERSTNLAT+GGRIKK TQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        KKGA DLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

A0A6J1C4B0 ABC transporter D family member 12.0e-4388.79Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG
        MPSLQLLHLTKHRH+ILASRRKTLLFATGVVLVGGTAAYL+SR  NKKSSSF+HYNGLDSN ERS NLATEG  IKKSTQKS GLKSLHALAAILLSKMG
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMG

Query:  KKGARDLLSLLGIVTM
        K+GARDLLSLLGIV +
Subjt:  KKGARDLLSLLGIVTM

SwissProt top hitse value%identityAlignment
Q94FB9 ABC transporter D family member 12.6e-1647.41Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK
        MPSLQLL LT+    ++ASRRK++L A G+V  GGTA YL+SR  +++  S    NG   + E    L    +  +I    +K  GLKSL  L AILLS+
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK

Query:  MGKKGARDLLSLLGIV
        MGK GARDLL+L+  V
Subjt:  MGKKGARDLLSLLGIV

Arabidopsis top hitse value%identityAlignment
AT4G39850.1 peroxisomal ABC transporter 11.8e-1747.41Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK
        MPSLQLL LT+    ++ASRRK++L A G+V  GGTA YL+SR  +++  S    NG   + E    L    +  +I    +K  GLKSL  L AILLS+
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK

Query:  MGKKGARDLLSLLGIV
        MGK GARDLL+L+  V
Subjt:  MGKKGARDLLSLLGIV

AT4G39850.2 peroxisomal ABC transporter 11.8e-1747.41Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK
        MPSLQLL LT+    ++ASRRK++L A G+V  GGTA YL+SR  +++  S    NG   + E    L    +  +I    +K  GLKSL  L AILLS+
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK

Query:  MGKKGARDLLSLLGIV
        MGK GARDLL+L+  V
Subjt:  MGKKGARDLLSLLGIV

AT4G39850.3 peroxisomal ABC transporter 11.8e-1747.41Show/hide
Query:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK
        MPSLQLL LT+    ++ASRRK++L A G+V  GGTA YL+SR  +++  S    NG   + E    L    +  +I    +K  GLKSL  L AILLS+
Subjt:  MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSR-GNKKSSSFNHYNGLDSNGERSTNLAT--EGGRIKKSTQKSSGLKSLHALAAILLSK

Query:  MGKKGARDLLSLLGIV
        MGK GARDLL+L+  V
Subjt:  MGKKGARDLLSLLGIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTCTTCAGTTGTTGCATTTAACCAAGCATCGCCACGATATTCTTGCTTCAAGGAGGAAAACTTTGCTATTTGCCACTGGCGTTGTTCTTGTTGGTGGGACTGC
TGCATATTTGCGATCACGGGGCAATAAAAAATCTTCATCTTTTAACCATTACAATGGGCTTGATAGTAATGGCGAGAGGTCTACAAATCTGGCAACAGAAGGTGGTAGGA
TCAAGAAAAGCACGCAGAAGAGTAGTGGACTCAAGTCACTTCATGCACTTGCCGCTATTCTGTTGTCTAAGATGGGCAAAAAGGGTGCCAGGGATCTATTATCTTTACTG
GGTATAGTGACCATGAATCTTGGAGAATTCTTGAAGAGTAAAAAGTATTATTCATTGTTATCATACATGAGGGGGAAGACTCCTATTTATAGAGTTTTAATACAAGTAGG
GGTGAAAAGGAAATTAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATCTCTTCAGTTGTTGCATTTAACCAAGCATCGCCACGATATTCTTGCTTCAAGGAGGAAAACTTTGCTATTTGCCACTGGCGTTGTTCTTGTTGGTGGGACTGC
TGCATATTTGCGATCACGGGGCAATAAAAAATCTTCATCTTTTAACCATTACAATGGGCTTGATAGTAATGGCGAGAGGTCTACAAATCTGGCAACAGAAGGTGGTAGGA
TCAAGAAAAGCACGCAGAAGAGTAGTGGACTCAAGTCACTTCATGCACTTGCCGCTATTCTGTTGTCTAAGATGGGCAAAAAGGGTGCCAGGGATCTATTATCTTTACTG
GGTATAGTGACCATGAATCTTGGAGAATTCTTGAAGAGTAAAAAGTATTATTCATTGTTATCATACATGAGGGGGAAGACTCCTATTTATAGAGTTTTAATACAAGTAGG
GGTGAAAAGGAAATTAACCTAG
Protein sequenceShow/hide protein sequence
MPSLQLLHLTKHRHDILASRRKTLLFATGVVLVGGTAAYLRSRGNKKSSSFNHYNGLDSNGERSTNLATEGGRIKKSTQKSSGLKSLHALAAILLSKMGKKGARDLLSLL
GIVTMNLGEFLKSKKYYSLLSYMRGKTPIYRVLIQVGVKRKLT