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HG10019104 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019104
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationChr04:16793342..16793650
RNA-Seq ExpressionHG10019104
SyntenyHG10019104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062727.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.4e-0750Show/hide
Query:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +L S L  +++M  ++I++C+GP EC KKDL++ ND DVKWV+HI+++NVE+
Subjt:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

TYK22525.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.4e-0750Show/hide
Query:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +L S L  +++M  ++I++C+GP EC KKDL++ ND DVKWV+HI+++NVE+
Subjt:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]4.5e-0629.55Show/hide
Query:  INVYYDDYFNELDNYVNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +++++  ++N+ DNYV Y+VS++++H +MS+ +    ++ +LG + +    +IF CIG  + + KD+ +++D DV W+++++   V Q
Subjt:  INVYYDDYFNELDNYVNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

XP_038889205.1 probable polygalacturonase At1g80170 [Benincasa hispida]1.0e-1037.21Show/hide
Query:  SINVYYDDYFNELDNY-VNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSA
        ++ + YD  FNE DNY ++Y+V+++  H QMSF E Q  ++ K+  + N   +EI  C+G K+ +KKDL +  D D++W+ +++S+
Subjt:  SINVYYDDYFNELDNY-VNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSA

TrEMBL top hitse value%identityAlignment
A0A5A7V6U1 Protein FAR1-RELATED SEQUENCE 3-like1.2e-0750Show/hide
Query:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +L S L  +++M  ++I++C+GP EC KKDL++ ND DVKWV+HI+++NVE+
Subjt:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

A0A5D3DG45 Protein FAR1-RELATED SEQUENCE 3-like1.2e-0750Show/hide
Query:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +L S L  +++M  ++I++C+GP EC KKDL++ ND DVKWV+HI+++NVE+
Subjt:  ALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

A0A6J1DNQ8 uncharacterized protein LOC1110223472.2e-0629.55Show/hide
Query:  INVYYDDYFNELDNYVNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ
        +++++  ++N+ DNYV Y+VS++++H +MS+ +    ++ +LG + +    +IF CIG  + + KD+ +++D DV W+++++   V Q
Subjt:  INVYYDDYFNELDNYVNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACACTGTTTTACTATAGATAATTCGAGTATCAATGTTTATTACGATGATTATTTCAACGAATTGGACAACTATGTTAATTACAGAGTATCGGATGTTGTTTTACA
CGCGCAAATGTCCTTTCAAGAATCACAACATGCTTTAATATCCAAGTTAGGCGGTATGTTGAATATGAAGAAACTAGAGATATTTGTGTGTATAGGACCTAAAGAATGTT
TGAAGAAGGATTTGAGTGTTACAAATGATACTGATGTCAAATGGGTTCATCACATATTATCTGCCAATGTCGAACAAGAATCGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTACACTGTTTTACTATAGATAATTCGAGTATCAATGTTTATTACGATGATTATTTCAACGAATTGGACAACTATGTTAATTACAGAGTATCGGATGTTGTTTTACA
CGCGCAAATGTCCTTTCAAGAATCACAACATGCTTTAATATCCAAGTTAGGCGGTATGTTGAATATGAAGAAACTAGAGATATTTGTGTGTATAGGACCTAAAGAATGTT
TGAAGAAGGATTTGAGTGTTACAAATGATACTGATGTCAAATGGGTTCATCACATATTATCTGCCAATGTCGAACAAGAATCGCTCTGA
Protein sequenceShow/hide protein sequence
MLHCFTIDNSSINVYYDDYFNELDNYVNYRVSDVVLHAQMSFQESQHALISKLGGMLNMKKLEIFVCIGPKECLKKDLSVTNDTDVKWVHHILSANVEQESL