; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019109 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019109
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationChr04:16897184..16899398
RNA-Seq ExpressionHG10019109
SyntenyHG10019109
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.7e-7292.26Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPS+V+IP++ L+STSKSSFNGLQI FPFSFRVPPK ACTGGRNS VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]2.0e-7292.86Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+VS PS+ L+STSKSSFNG QI FPFSFRVPPKTA TGGRNSSVVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]4.5e-7292.26Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPS+VS PS+ L+STSKSSFNG QI FPFSFRVPPKTA TGGRNSSVVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022985118.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]2.7e-7292.86Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V+IP++ L+STSKSSFNGLQI FPFSFRVPPK AC GGRNS VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_038903244.1 50S ribosomal protein L29, chloroplastic [Benincasa hispida]1.7e-7495.24Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSTVSIP ++L STSKSSFNGLQI FPFSFRVPPKTACTGGRNSSVVMMAKREEELK+IRAK+TEEI EEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A0A0KVL7 Uncharacterized protein4.6e-7091.18Show/hide
Query:  MINLSIAS-PSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTG-GRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
        MINLSIAS PST+ IPS+ LNSTSKSSFN LQI FPFSFR+PPKTA TG GRNSSVVMMAKRE+ELKDIR+KTTEEINEEV+DLKGELLMLRLQKSARNE
Subjt:  MINLSIAS-PSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTG-GRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like3.5e-7091.46Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPS+V+IP++ L+STSKSSFNGLQI FPFS RVPPK ACTGGRNS VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE++
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like9.9e-7392.86Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+VS PS+ L+STSKSSFNG QI FPFSFRVPPKTA TGGRNSSVVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like2.2e-7292.26Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPS+VS PS+ L+STSKSSFNG QI FPFSFRVPPKTA TGGRNSSVVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like1.3e-7292.86Show/hide
Query:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V+IP++ L+STSKSSFNGLQI FPFSFRVPPK AC GGRNS VVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
B8HMR2 50S ribosomal protein L293.2e-0433.33Show/hide
Query:  ELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE
        ++KD+   +  E+  +++DLK +L  LRLQK+ R E K  +F+ +R ++A+++T++R+R++ +
Subjt:  ELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE

P82248 50S ribosomal protein L29, chloroplastic1.2e-3862.84Show/hide
Query:  SKSSFNGLQ---ICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKR
        +KSSF+GL+   +    S R+  +T       SSVV+M K+E+ELK++R KT E++NEE++ LKGEL MLRLQ+SAR  FK S+F RMRKR+ARMLTVKR
Subjt:  SKSSFNGLQ---ICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKR

Query:  EREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS
        EREIE+GVGKRLSRKLD+ WK+SIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  EREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L294.2e-0446.77Show/hide
Query:  KDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG
        K+IR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIE+G
Subjt:  KDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG

Q9FJP3 50S ribosomal protein L29, chloroplastic4.0e-4767.26Show/hide
Query:  MINLSIASPSTVSIPSRILNS--TSKSSFNGLQICFPFSFRVP-PKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P T +I  R   S  ++ SSF+G++I    S RVP   T  +     SVVMM+KRE ELK+IR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASPSTVSIPSRILNS--TSKSSFNGLQICFPFSFRVP-PKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic9.3e-3675Show/hide
Query:  RNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP
        R +++V MAKRE+EL++IRA TTE++ EEVVDLKGEL +LRL++SAR EFK+SEF RMRKRIARMLTVKREREIE+G+ KRLSRKLDRKWK+SIVVRPPP
Subjt:  RNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP

Query:  SLKKLREE
        SL+  +EE
Subjt:  SLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein2.9e-4867.26Show/hide
Query:  MINLSIASPSTVSIPSRILNS--TSKSSFNGLQICFPFSFRVP-PKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P T +I  R   S  ++ SSF+G++I    S RVP   T  +     SVVMM+KRE ELK+IR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASPSTVSIPSRILNS--TSKSSFNGLQICFPFSFRVP-PKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCTTTCAATTGCTTCGCCTTCCACCGTTTCTATTCCTTCAAGAATTCTTAACTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCTGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAACGGCATGTACCGGAGGCCGCAATTCTTCGGTGGTAATGATGGCCAAGAGGGAGGAGGAATTGAAGGATATCAGAGCGAAAACTACAGAGG
AAATAAATGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCGGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAAACGCGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACC
ACCTCCATCACTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCCGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAACCTTTCAATTGCTTCGCCTTCCACCGTTTCTATTCCTTCAAGAATTCTTAACTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATCTGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAACGGCATGTACCGGAGGCCGCAATTCTTCGGTGGTAATGATGGCCAAGAGGGAGGAGGAATTGAAGGATATCAGAGCGAAAACTACAGAGG
AAATAAATGAAGAGGTCGTCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAAAAATCGGCCCGCAATGAGTTTAAGTCTAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAAACGCGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTTGTCAGACC
ACCTCCATCACTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCCGAAGAAGCTGAGAAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MINLSIASPSTVSIPSRILNSTSKSSFNGLQICFPFSFRVPPKTACTGGRNSSVVMMAKREEELKDIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKR
IARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA