; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019117 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019117
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationChr04:17080342..17081007
RNA-Seq ExpressionHG10019117
SyntenyHG10019117
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.2e-6156.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

KAA0066702.1 uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]1.1e-6256.14Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE FV LI++E+  +AS SSI+LS LLD+ + ++QNVV+I EDKDV WFL+LVK H T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV++  LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKE D+FASKE+LS  FY+IA+K NFEFKT+RSNS+S+ F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK++  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.2e-6156.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

XP_038891569.1 uncharacterized protein LOC120080959 [Benincasa hispida]3.4e-6782.21Show/hide
Query:  MVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKHHLVAHVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDD
        MVFEDF+ LIVKEI L+  TSSIEL  LLDFVMNEVQNVV+I EDKD+AWFLALVKEHN +H LVAH +SSCLE SSN++SSGA+NYLS +PSS PMIDD
Subjt:  MVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKHHLVAHVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDD

Query:  GNFQVIMDIHIAGDLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGCQW
        G+FQVIMDIHI  DLKEKDVFASKEILSNCFY IAVKKNFEFKTI SNSR+IVFRCVQDGCQW
Subjt:  GNFQVIMDIHIAGDLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGCQW

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]6.8e-9281.57Show/hide
Query:  MVIPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKHHLVAHV
        MVIPIV+FH GIWNEK  YVNYK+ GVLVDDIM FEDFV LIVKEI L+AS SSIELS LLDF MN+VQN+VEIHEDKDVAWFL LVKE +T+H LVAHV
Subjt:  MVIPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKHHLVAHV

Query:  TSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAGDLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGCQWYVRVS
        TS CLE SS+++SS A+NYLSI+P S+PMIDD +FQVIMDIHIA DLKEKDVFASKEILS CFY+IAVKKNFEFKT+RSNSRSI FRCVQDGCQWYVR S
Subjt:  TSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAGDLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGCQWYVRVS

Query:  RYKGSVLWMLRKFIDIH
        RYK S LWMLRKFIDIH
Subjt:  RYKGSVLWMLRKFIDIH

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like6.0e-6256.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

A0A5A7VEB2 DBD_Tnp_Mut domain-containing protein5.5e-6356.14Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE FV LI++E+  +AS SSI+LS LLD+ + ++QNVV+I EDKDV WFL+LVK H T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV++  LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKE D+FASKE+LS  FY+IA+K NFEFKT+RSNS+S+ F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK++  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

A0A5D3BH55 DBD_Tnp_Mut domain-containing protein6.0e-6256.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

A0A5D3C8T8 SWIM-type domain-containing protein6.0e-6256.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like6.0e-6256.58Show/hide
Query:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA
        +PIV+FHSG W++ + Y+NYK+TGVLVD++M FE+FV LI++E+  +AS SSI+LS LLD+ +  +Q VV+I EDKDV WFL+LVK   T+H    H +A
Subjt:  IPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKH----HLVA

Query:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC
        HV    LE SS ++ SG  N  S++PSS   IDD +FQ++ DIH++      DLKEKD+FASKE+LS  FY+IA+K NFEFKT+RSNS+SI F+C QD C
Subjt:  HVTSSCLEVSSNILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAG-----DLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGC

Query:  QWYVRVSRYKGSVLWMLRKFIDIHARSI
         WYVR SRYKG  LW LRK+I  H  SI
Subjt:  QWYVRVSRYKGSVLWMLRKFIDIHARSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATTCCAATAGTTATTTTTCACAGTGGAATATGGAATGAAAAACATTGTTATGTGAATTACAAGAGTACTGGAGTTTTAGTAGATGATATAATGGTTTTTGAAGA
TTTTGTGGATTTAATAGTGAAGGAGATTGGTTTGAATGCATCTACTTCTTCTATAGAACTATCAAATTTATTAGATTTTGTTATGAATGAAGTTCAAAACGTAGTCGAAA
TTCATGAAGATAAGGACGTAGCTTGGTTTTTGGCTTTAGTTAAGGAACACAATACAAAACATCATTTGGTTGCTCATGTCACTAGTTCATGTTTGGAAGTTTCTTCTAAT
ATTCTTTCTAGTGGAGCTAAGAATTATTTGTCTATTATTCCTTCTTCTATACCTATGATTGATGATGGTAACTTCCAAGTGATTATGGATATACATATTGCTGGTGATTT
AAAAGAAAAAGATGTGTTTGCTAGTAAAGAGATTTTATCAAATTGTTTTTACTTCATAGCAGTCAAGAAGAACTTTGAATTTAAGACTATAAGATCAAATTCAAGATCAA
TTGTGTTTCGATGTGTTCAAGATGGTTGTCAATGGTATGTGAGAGTATCCCGTTACAAGGGCAGTGTTTTGTGGATGCTTAGGAAGTTTATTGATATTCATGCTCGTTCT
ATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTATTCCAATAGTTATTTTTCACAGTGGAATATGGAATGAAAAACATTGTTATGTGAATTACAAGAGTACTGGAGTTTTAGTAGATGATATAATGGTTTTTGAAGA
TTTTGTGGATTTAATAGTGAAGGAGATTGGTTTGAATGCATCTACTTCTTCTATAGAACTATCAAATTTATTAGATTTTGTTATGAATGAAGTTCAAAACGTAGTCGAAA
TTCATGAAGATAAGGACGTAGCTTGGTTTTTGGCTTTAGTTAAGGAACACAATACAAAACATCATTTGGTTGCTCATGTCACTAGTTCATGTTTGGAAGTTTCTTCTAAT
ATTCTTTCTAGTGGAGCTAAGAATTATTTGTCTATTATTCCTTCTTCTATACCTATGATTGATGATGGTAACTTCCAAGTGATTATGGATATACATATTGCTGGTGATTT
AAAAGAAAAAGATGTGTTTGCTAGTAAAGAGATTTTATCAAATTGTTTTTACTTCATAGCAGTCAAGAAGAACTTTGAATTTAAGACTATAAGATCAAATTCAAGATCAA
TTGTGTTTCGATGTGTTCAAGATGGTTGTCAATGGTATGTGAGAGTATCCCGTTACAAGGGCAGTGTTTTGTGGATGCTTAGGAAGTTTATTGATATTCATGCTCGTTCT
ATATAA
Protein sequenceShow/hide protein sequence
MVIPIVIFHSGIWNEKHCYVNYKSTGVLVDDIMVFEDFVDLIVKEIGLNASTSSIELSNLLDFVMNEVQNVVEIHEDKDVAWFLALVKEHNTKHHLVAHVTSSCLEVSSN
ILSSGAKNYLSIIPSSIPMIDDGNFQVIMDIHIAGDLKEKDVFASKEILSNCFYFIAVKKNFEFKTIRSNSRSIVFRCVQDGCQWYVRVSRYKGSVLWMLRKFIDIHARS
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