; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019149 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019149
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationChr04:17652730..17657304
RNA-Seq ExpressionHG10019149
SyntenyHG10019149
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462873.1 PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo]4.9e-10297.03Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDDIDMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG     KVPRFRMPTRYGP
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP

Query:  YY
        YY
Subjt:  YY

XP_008462875.1 PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo]6.9e-10499.49Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDDIDMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_011653388.1 polyadenylate-binding protein 2 isoform X3 [Cucumis sativus]3.4e-10398.48Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDD+DMIGSD NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_022140995.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]3.8e-10297.46Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

XP_038877304.1 polyadenylate-binding protein 2-like [Benincasa hispida]9.0e-10498.98Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDD+DMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ1 RRM domain-containing protein1.7e-10398.48Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDD+DMIGSD NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A1S3CHX7 polyadenylate-binding protein 2-like isoform X23.3e-10499.49Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDDIDMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A1S3CIE7 polyadenylate-binding protein 2-like isoform X12.4e-10297.03Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDDIDMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG     KVPRFRMPTRYGP
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG-----KVPRFRMPTRYGP

Query:  YY
        YY
Subjt:  YY

A0A5A7V2R3 Polyadenylate-binding protein 2-like isoform X23.3e-10499.49Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEHDDIDMIGSDTNDAVELDDMKKRLK+MEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

A0A6J1CGQ3 polyadenylate-binding protein 2-like isoform X11.8e-10297.46Show/hide
Query:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        MEH+DIDMIGS++NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
Subjt:  MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
        RTDKFGQPKGYAYVEF+EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 27.8e-3450.57Show/hide
Query:  DMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-
        D    DT +  EL +MK+R+ EME EAA LR MQ +++ E  ++++         ++E +D++SV+VGNVDYS TPEE+Q HF SCG+VNR+TI  DKF 
Subjt:  DMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-

Query:  GQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-----RSNPFMGARSRSPYVAPY
        G PKG+AY+EF EP  V  ALLLN S LH R LKVT KRTN+PGM + R R     R     G R R+   APY
Subjt:  GQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-----RSNPFMGARSRSPYVAPY

Q93VI4 Polyadenylate-binding protein 11.6e-6368.45Show/hide
Query:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK
        GS + D   L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVDSRS++VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPK
Subjt:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK

Query:  GYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        G+AYVEFVE EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Subjt:  GYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Q9DDY9 Polyadenylate-binding protein 2-A2.8e-3141.83Show/hide
Query:  EHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAA---ASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        E +  ++ G  T +  EL+ +K R++EME+EA  L+E+Q +VEK+M+    P +A     S   + E D+RS++VGNVDY  T EE++ HF  CG+VNR+
Subjt:  EHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAA---ASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKF-GQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMK---------QYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR
        TI  DKF G PKG+AY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+          +YR R S+      SRS + + Y   P G     R R
Subjt:  TIRTDKF-GQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMK---------QYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFR

Query:  MPTRYGPY
          + Y PY
Subjt:  MPTRYGPY

Q9FJN9 Polyadenylate-binding protein 22.6e-7776.04Show/hide
Query:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        D+DM  +D +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +EEVD+RSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDK
Subjt:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEFVE EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Q9LX90 Polyadenylate-binding protein 32.2e-7675Show/hide
Query:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  +D +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEFVE EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-7775Show/hide
Query:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  +D +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEFVE EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-7175.28Show/hide
Query:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        DIDM  +D +   EL +MK+RLKEME+EAAALREMQAKVEKEM + QDPAS AA+Q  +EEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI  DK
Subjt:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG
        FGQPKG+AYVEFVE EAVQEAL LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V PYF+SPYGYG
Subjt:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYG

AT5G51120.1 polyadenylate-binding protein 11.1e-6468.45Show/hide
Query:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK
        GS + D   L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A +EEVDSRS++VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPK
Subjt:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPK

Query:  GYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        G+AYVEFVE EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V   F+ PY YG+VPRFR P RY PY
Subjt:  GYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY

AT5G51120.2 polyadenylate-binding protein 12.1e-5855.8Show/hide
Query:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQ-------------------------------------DPASAAASQANREEVDSRSVF
        GS + D   L+DMKKR+KE+E+EA ALREMQAK EK+M + Q                                     +  ++  S A +EEVDSRS++
Subjt:  GSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQ-------------------------------------DPASAAASQANREEVDSRSVF

Query:  VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA
        VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEFVE EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V 
Subjt:  VGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVA

Query:  PYFFSPYGYGKVPRFRMPTRYGPY
          F+ PY YG+VPRFR P RY PY
Subjt:  PYFFSPYGYGKVPRFRMPTRYGPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-7876.04Show/hide
Query:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK
        D+DM  +D +   ELD+MKKRLKEMEDEAAALREMQAKVEKEM + QDPAS AA+QA +EEVD+RSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI TDK
Subjt:  DIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDK

Query:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY
        FGQPKG+AYVEFVE EAVQEAL LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P+++PY +SPYGYGK PRFR P RY PY
Subjt:  FGQPKGYAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACGATGACATCGACATGATTGGCTCCGACACCAACGACGCTGTGGAGTTAGACGACATGAAGAAGCGGTTGAAAGAGATGGAAGATGAAGCTGCTGCACTACG
TGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCGGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATTCACGGTCAGTGTTTGTTG
GCAATGTTGACTATTCATGTACTCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGGACTGTAAACAGAATCACTATTCGCACTGATAAGTTCGGGCAACCAAAGGGT
TATGCGTATGTTGAATTCGTAGAGCCAGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCAGAACTGCATGGTCGACAGCTTAAGGTAACTGCCAAGAGGACAAACAT
ACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTCATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAG
TCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACGATGACATCGACATGATTGGCTCCGACACCAACGACGCTGTGGAGTTAGACGACATGAAGAAGCGGTTGAAAGAGATGGAAGATGAAGCTGCTGCACTACG
TGAGATGCAGGCCAAGGTCGAGAAGGAAATGAGTTCTGTACAAGATCCGGCAAGTGCTGCTGCAAGTCAAGCAAATAGGGAGGAAGTGGATTCACGGTCAGTGTTTGTTG
GCAATGTTGACTATTCATGTACTCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGGACTGTAAACAGAATCACTATTCGCACTGATAAGTTCGGGCAACCAAAGGGT
TATGCGTATGTTGAATTCGTAGAGCCAGAAGCTGTTCAAGAGGCTCTCCTTCTGAATGAATCAGAACTGCATGGTCGACAGCTTAAGGTAACTGCCAAGAGGACAAACAT
ACCTGGGATGAAGCAGTATCGTCCACGCCGATCCAATCCATTCATGGGTGCTCGATCCAGGAGCCCATATGTTGCTCCTTATTTCTTCTCACCATATGGATACGGGAAAG
TCCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA
Protein sequenceShow/hide protein sequence
MEHDDIDMIGSDTNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKG
YAYVEFVEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYVAPYFFSPYGYGKVPRFRMPTRYGPYY