CuGenDBv2

Gene ID	HG10019159
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	classical arabinogalactan protein 4
Genome location	Chr04:17950788..17951360
RNA-Seq Expression	HG10019159
Synteny	HG10019159
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649311.1 hypothetical protein Csa_014808 [Cucumis sativus]

9.1e-61

83.52

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLIS AANSP PSPAP+ ESP+WKWTP+NEPPSSPPT EPP+ TTSPPSPTISPP TPPELSPVP+++APT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAI
        PPAVKSPSHAPSPAKTKAPAPAP+K SP PAKAPKSSKAP SSPPSPNG+MEPP PSVAPA  KEGNG GANRFAI
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAI

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.2e-54

74.21

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP
        MAS  VLNV+T ALLLISAAANSPLPSPAPSPESP WKWTP+ E PSSPP +EPP          SP  +PPELSPVPS+  PT PP  NPPTLSP A P
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAP+KMSP PA+APKSS  P SSPP+PNG MEPP PSVAP  PK  NGG ANRFAIGGSVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

5.5e-66

82.72

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLISAAANSP PSPAPS ESP+WKWTP N+PPSSPPT EPP+ TTSPPSPTISPPATPPELSPVPS+++PT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAP+K+SP PAKAPKSSKAP SSPPSPNG+MEPP PS APA  KEGNG GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]

2.7e-65

83.25

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLIS AANSP PSPAP+ ESP+WKWTP+NEPPSSPPT EPP+ TTSPPSPTISPP TPPELSPVP+++APT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTKAPAPAP+K SP PAKAPKSSKAP SSPPSPNG+MEPP PSVAPA  KEGNG GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

4.3e-71

87.89

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP
        MASSTVL VLTVALLLISAAANSP+PSPAP PESP+WKWTP+NEPPSSPP  EPP+TTSPPSPTISPPATPPE+SP+PS++APTLPPK NPPTLSPTA P
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        P VKSPSHAPSPAKTKAPAPAP+KMSP PAKAPKSSKAPASSPPSPNG MEPPAPSVAPA  K+ NGG ANRFAIGGSVAVGLMIAALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

1.3e-65

83.25

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLIS AANSP PSPAP+ ESP+WKWTP+NEPPSSPPT EPP+ TTSPPSPTISPP TPPELSPVP+++APT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PPAVKSPSHAPSPAKTKAPAPAP+K SP PAKAPKSSKAP SSPPSPNG+MEPP PSVAPA  KEGNG GANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

A0A1S3CHW9 classical arabinogalactan protein 4

2.7e-66

82.72

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLISAAANSP PSPAPS ESP+WKWTP N+PPSSPPT EPP+ TTSPPSPTISPPATPPELSPVPS+++PT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAP+K+SP PAKAPKSSKAP SSPPSPNG+MEPP PS APA  KEGNG GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

A0A5A7V3Q7 Classical arabinogalactan protein 4

2.7e-66

82.72

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP
        MASST+LN+LT+A LLISAAANSP PSPAPS ESP+WKWTP N+PPSSPPT EPP+ TTSPPSPTISPPATPPELSPVPS+++PT PP  NPPTLSPTAP
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPV-TTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PPAV SPSHAPSPAKTKAPAPAP+K+SP PAKAPKSSKAP SSPPSPNG+MEPP PS APA  KEGNG GANRFAIGGS+A G MIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

A0A6J1E3R0 extensin-like

1.3e-52

72.63

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP
        MAS  VLNV+T ALLLISA+ANSPLPSPAPSPESP WKWTP+ + PSSPP +EPP          SP  +PPELSPVPS+  PT PP  NPPTLSP A P
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAP+KMS  PA+APKSS AP SSPP+PNG MEPP PSVAP  PK  NGG ANRFAIGG+VA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

A0A6J1JCM0 extensin-like

2.0e-50

72.11

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Query:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP
        MAS  VLNV+T ALLLISA+ANSPLPS APSPES  WKWTP+ E PSSPP +EPP          SP  +PPELSPVPS+  PT P   NPPTLSP A P
Subjt:  MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP

Query:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA
        PAVKSP HAPSP+KTKAPAPAP+KMSP PA+APKSS APASSPP+PNG MEPP PSVAP  PK  NGG ANRFAI  SVA GLM AALIA
Subjt:  PAVKSPSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

SwissProt top hits

e value

%identity

Alignment

Q9FPQ6 Vegetative cell wall protein gp1

5.1e-06

44.3

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Query:  SPLPSPAPSPESPSWKWTPNNEPPSS----PPTVEPPVTTS--PPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP-PAVKSPSHAPSPAKT
        SP   P+PSP SP+    P+  PPS     PP+  PPV  S  PPSPT   P+ P   SP P + AP +PP   PP+ +P  PP PA  SP   PSPA  
Subjt:  SPLPSPAPSPESPSWKWTPNNEPPSS----PPTVEPPVTTS--PPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPP-PAVKSPSHAPSPAKT

Query:  KAPAPAPTKMSP--PPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVP
          P+PAP   SP  PP+  P S   P+ +PPSP     PP PS  P  P
Subjt:  KAPAPAPTKMSP--PPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVP

Arabidopsis top hits

e value

%identity

Alignment

AT1G44191.1 ECA1 gametogenesis related family protein

4.4e-05

37.11

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Query:  ISAAANSPLPSPAPSPESPSWK----WTPNNEPPS---SPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPPPAVKS----
        +S +  SP   P+P P +PS +     +P   PPS   SPP   P  +  PP P+ SPP  P +  P P   +P   PK +PP   P++PPP+ K     
Subjt:  ISAAANSPLPSPAPSPESPSWK----WTPNNEPPS---SPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPPPAVKS----

Query:  PSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKE
        P  +PSP K   P P P K  P P K      +P  SPP P     PP PS  P  PK+
Subjt:  PSHAPSPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKE

Sequences

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CDS sequence

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ATGGCTTCCTCCACCGTTCTGAATGTTCTCACGGTGGCGCTCCTGCTGATCTCCGCCGCTGCCAACTCCCCGCTACCGTCTCCAGCACCGAGCCCCGAATCACCGTCGTG
GAAATGGACTCCCAATAACGAGCCACCGTCCTCTCCACCGACAGTGGAACCGCCAGTGACGACGTCTCCACCTTCACCGACAATATCTCCGCCAGCCACCCCACCGGAGT
TGAGTCCCGTTCCATCAACCCATGCACCGACTCTGCCGCCGAAGACTAACCCACCCACATTGTCGCCGACCGCTCCACCGCCAGCAGTGAAGAGTCCCAGTCATGCGCCA
TCGCCGGCAAAAACGAAAGCACCAGCTCCGGCTCCGACCAAAATGAGTCCGCCGCCGGCCAAGGCACCGAAATCTTCTAAAGCTCCGGCGAGTAGTCCTCCGTCACCGAA
TGGAAGGATGGAACCACCGGCGCCATCAGTAGCTCCGGCAGTGCCGAAGGAGGGTAACGGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAA
TGATTGCGGCTTTAATCGCTTAA

mRNA sequence

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Protein sequence

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MASSTVLNVLTVALLLISAAANSPLPSPAPSPESPSWKWTPNNEPPSSPPTVEPPVTTSPPSPTISPPATPPELSPVPSTHAPTLPPKTNPPTLSPTAPPPAVKSPSHAP
SPAKTKAPAPAPTKMSPPPAKAPKSSKAPASSPPSPNGRMEPPAPSVAPAVPKEGNGGGANRFAIGGSVAVGLMIAALIA

HG10019159 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome