; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019173 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019173
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Genome locationChr04:18166449..18170249
RNA-Seq ExpressionHG10019173
SyntenyHG10019173
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147506.1 uncharacterized protein LOC101214901 [Cucumis sativus]2.8e-8991Show/hide
Query:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN
        MER+GEG PA A AA    SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+AFF VLAETEWEFIFKN
Subjt:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN

Query:  WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKD+VVKDLQELERQKQELEQLLISETV
Subjt:  WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

XP_008454462.1 PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]2.8e-8990.91Show/hide
Query:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK
        MER+GEG PAA  ++++SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+ FFVVLAETEWEFIFKNWK
Subjt:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK

Query:  VLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKD+VVKDLQELERQKQELEQLLISETV
Subjt:  VLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

XP_022922529.1 uncharacterized protein LOC111430498 [Cucurbita moschata]1.1e-8586.93Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KDRVVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

XP_023552582.1 uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo]1.4e-8586.43Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNV++AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KDRVVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]1.1e-8891.84Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL
        MERDGEG P  AAAASSS Q  RP RRVDP LVTCRFFSV+TALTAILCIVSNVISAIRSF+NKSD+FDGIFRCYAVV+A FVVLAETEWEFI KNWKVL
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL

Query:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        EYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVSGILCIGFLKRARE+KETAKDRVVKDLQELERQKQELEQLLISETV
Subjt:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein1.4e-8991Show/hide
Query:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN
        MER+GEG PA A AA    SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+AFF VLAETEWEFIFKN
Subjt:  MERDGEGGPAAAAAA----SSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKN

Query:  WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKD+VVKDLQELERQKQELEQLLISETV
Subjt:  WKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

A0A1S3BY74 uncharacterized protein LOC1034948611.4e-8990.91Show/hide
Query:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK
        MER+GEG PAA  ++++SSS QITRP R VDP LVTCRFFSVITALTAILCIVSNVISAIRSF+N+SDIFDGIFRCYAVV+ FFVVLAETEWEFIFKNWK
Subjt:  MERDGEGGPAA--AAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWK

Query:  VLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        VLEYWAGRGMLQIFVAVMTRAFPVYSVEQR+LILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKD+VVKDLQELERQKQELEQLLISETV
Subjt:  VLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

A0A6J1D697 uncharacterized protein LOC1110177047.2e-7576.47Show/hide
Query:  MERDGEGG-------PAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFI
        M +DGE         PAA++++SSS   TR  RRVDP LVTCRFFSV+TALTAILCIV NVISA+RSF++K+DIFDGIFRCYAV++A FVVLAETEWEFI
Subjt:  MERDGEGG-------PAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFI

Query:  FKNWKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELE-QLLI
         K WKVLEYWAGRGMLQIFVAVMTRAFP YS +QR+LI+LQD ASYLLL CGAVYV SGILC+GFLKRARE+KETAK+R VKDLQELERQKQELE +LLI
Subjt:  FKNWKVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELE-QLLI

Query:  SETV
        +E+V
Subjt:  SETV

A0A6J1E3M8 uncharacterized protein LOC1114304985.3e-8686.93Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q +RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KDRVVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

A0A6J1J849 uncharacterized protein LOC1114826129.1e-8686.93Show/hide
Query:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW
        MER GEG   G  AAA A+SS Q  RP RRVDP LVTCRFFSV+TALTAILCIVSNVI+AIRSF+NKSDIFDGIFRCYAVV+AFFVVLAETEWEFI KNW
Subjt:  MERDGEG---GPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNW

Query:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV
        KVLEYWAGRGMLQIFVAVMTRAFP YSVEQR+ ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KDRVVKDLQELERQKQELEQLLIS++V
Subjt:  KVLEYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).6.3e-6363.54Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL
        M+R  E   + A  +S S ++ +   R DPFLV CR FS++T+L AILC+V NV++A+RSFR+  D+FDGIFRCYAVV+A FVVL ETEW FI K  KVL
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL

Query:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLI
        EYWAGRGMLQIFVAVMTRAFP Y  +++DL+LLQ+ ASYLLLACG +YV+SG+LCIGFLKRAR++KE ++++ VKDL+E+ R+K+ELEQLL+
Subjt:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLI

AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).2.0e-6163.54Show/hide
Query:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL
        M+R  E   + A  +S S ++ +   R DPFLV CR FS++T+L AILC+V NV++A+RSFR+  D+FDGIFRCYAVV+A FVVL ETEW FI K  KVL
Subjt:  MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVL

Query:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLI
        EYWAGRGMLQIFVAVMTRAFP Y  +++DL+LLQ+ ASYLLLACG +YV+SG+LCIGFLKRAR++KE ++++ VKDL E+ R+K+ELEQLL+
Subjt:  EYWAGRGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGACGGAGAGGGAGGACCGGCAGCGGCGGCGGCGGCGTCGTCGTCTTGTCAGATCACCAGACCTAGTAGGAGGGTGGACCCTTTTCTTGTCACTTGC
AGGTTTTTCAGTGTTATAACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGGTCCTTTAGGAACAAATCCGATATATTCGATGGT
ATATTTCGGTGTTATGCAGTTGTGGTCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTTTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGC
CGGGGCATGTTGCAAATCTTTGTTGCAGTCATGACAAGAGCCTTCCCGGTGTATTCTGTAGAGCAGAGAGATCTTATTCTTCTTCAAGATGCTGCAAGTTATCTC
CTCCTTGCCTGTGGTGCAGTCTATGTTGTATCGGGAATACTGTGCATTGGGTTTCTCAAACGAGCTCGTGAAAAGAAAGAGACTGCAAAGGACAGGGTGGTCAAA
GATCTTCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGAAACTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGACGGAGAGGGAGGACCGGCAGCGGCGGCGGCGGCGTCGTCGTCTTGTCAGATCACCAGACCTAGTAGGAGGGTGGACCCTTTTCTTGTCACTTGC
AGGTTTTTCAGTGTTATAACAGCTCTCACTGCTATTCTCTGCATTGTTTCCAATGTTATCTCTGCGATTCGGTCCTTTAGGAACAAATCCGATATATTCGATGGT
ATATTTCGGTGTTATGCAGTTGTGGTCGCATTCTTCGTGGTTCTTGCTGAGACGGAATGGGAATTTATTTTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGC
CGGGGCATGTTGCAAATCTTTGTTGCAGTCATGACAAGAGCCTTCCCGGTGTATTCTGTAGAGCAGAGAGATCTTATTCTTCTTCAAGATGCTGCAAGTTATCTC
CTCCTTGCCTGTGGTGCAGTCTATGTTGTATCGGGAATACTGTGCATTGGGTTTCTCAAACGAGCTCGTGAAAAGAAAGAGACTGCAAAGGACAGGGTGGTCAAA
GATCTTCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGAAACTGTTTGA
Protein sequenceShow/hide protein sequence
MERDGEGGPAAAAAASSSCQITRPSRRVDPFLVTCRFFSVITALTAILCIVSNVISAIRSFRNKSDIFDGIFRCYAVVVAFFVVLAETEWEFIFKNWKVLEYWAG
RGMLQIFVAVMTRAFPVYSVEQRDLILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDRVVKDLQELERQKQELEQLLISETV