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HG10019191 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019191
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:18509156..18509552
RNA-Seq ExpressionHG10019191
SyntenyHG10019191
Gene Ontology termsGO:0045488 - pectin metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454502.1 PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]6.1e-1374.63Show/hide
Query:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG
        MG FEV  L N +S+RQN VR  +ARGASRYISSVRYRSL SLLL+IGLLI MV TLFLGY YH SG
Subjt:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG

XP_011654354.1 probable pectin methylesterase CGR3 [Cucumis sativus]5.2e-1273.13Show/hide
Query:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG
        MG  EV  + N +S+RQNPVR  +AR ASRYISSVR RSL SLLLFIGLLI MVTTLFLGY YH SG
Subjt:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG

XP_022149264.1 uncharacterized protein At3g49720-like [Momordica charantia]5.2e-1267.69Show/hide
Query:  MGGFEVPMLFNVVSLRQNPV--RLARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVS
        MGGFEV ML NV+S+R++ V    ARG SRYI+SVRYRSLPSL+L+ GLL M T L LGYLYHV+
Subjt:  MGGFEVPMLFNVVSLRQNPV--RLARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVS

XP_038905892.1 probable pectin methylesterase CGR3 [Benincasa hispida]6.8e-1274.24Show/hide
Query:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVSG
        M  FEV +L N V LRQNPVR  + RGASRYISS RYRSL SLLL IGLLIMV TL LGYLYH SG
Subjt:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVSG

TrEMBL top hitse value%identityAlignment
A0A1S3BYV5 uncharacterized protein At3g49720-like3.0e-1374.63Show/hide
Query:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG
        MG FEV  L N +S+RQN VR  +ARGASRYISSVRYRSL SLLL+IGLLI MV TLFLGY YH SG
Subjt:  MGGFEVPMLFNVVSLRQNPVR--LARGASRYISSVRYRSLPSLLLFIGLLI-MVTTLFLGYLYHVSG

A0A6J1D594 uncharacterized protein At3g49720-like2.5e-1267.69Show/hide
Query:  MGGFEVPMLFNVVSLRQNPV--RLARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVS
        MGGFEV ML NV+S+R++ V    ARG SRYI+SVRYRSLPSL+L+ GLL M T L LGYLYHV+
Subjt:  MGGFEVPMLFNVVSLRQNPV--RLARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGCTTTGAAGTTCCTATGCTATTTAATGTGGTGTCATTGAGGCAAAATCCAGTGCGTCTTGCTCGTGGAGCCAGTCGATACATAAGTTCTGTTCGTTATAGGTC
ACTACCATCACTTTTATTATTCATAGGTCTTCTGATAATGGTCACAACCCTTTTTCTAGGATATCTCTATCATGTATCAGGTTCGTATTTGTTACTAAACTTGACGAGAC
AGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGCTTTGAAGTTCCTATGCTATTTAATGTGGTGTCATTGAGGCAAAATCCAGTGCGTCTTGCTCGTGGAGCCAGTCGATACATAAGTTCTGTTCGTTATAGGTC
ACTACCATCACTTTTATTATTCATAGGTCTTCTGATAATGGTCACAACCCTTTTTCTAGGATATCTCTATCATGTATCAGGTTCGTATTTGTTACTAAACTTGACGAGAC
AGTAG
Protein sequenceShow/hide protein sequence
MGGFEVPMLFNVVSLRQNPVRLARGASRYISSVRYRSLPSLLLFIGLLIMVTTLFLGYLYHVSGSYLLLNLTRQ