; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019205 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019205
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box family protein
Genome locationChr04:18647859..18648422
RNA-Seq ExpressionHG10019205
SyntenyHG10019205
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044316.1 F-box protein SKIP22-like [Cucumis melo var. makuwa]2.8e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

XP_004150266.1 F-box protein SKIP22 [Cucumis sativus]3.7e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        +DEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EAL GVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R WK KFVE+YEKEK RNRRTSNMRDL++ GRRRRPPYPFPVPHIIGGD+DIVPGIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

XP_008454420.1 PREDICTED: F-box protein SKIP22-like [Cucumis melo]2.8e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

XP_022149297.1 F-box protein SKIP22-like [Momordica charantia]5.6e-7976.56Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDE EGNPE+QVFE WKVVKDALALPLLID+CEKTGLPPPASFMLLPADVKLKI+EALP VD+GRV CVCTELRYL SSNELWK+KFNQEFG ED V G 
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRR-----RRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        RLWKPK+V + E EKLRNRRT+ +RDLV   R+     RR P+PFP PH+IGGDYDIVPGIRLP YG  PGQ+L R+PRR+ FMP+ DLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRR-----RRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

XP_038905379.1 F-box protein SKIP22-like [Benincasa hispida]1.2e-9491.44Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+E+LPGVD+ RV CVCTELRYL SSNELWKMKFNQ FGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        RLWKPKFV++YEKEKLRNRR+SNMRDLVS GRRRRPPYPFPVPHIIGGDYDIVPGIRLP Y GVP QSLPRIPRRH FMPHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

TrEMBL top hitse value%identityAlignment
A0A0A0KT22 F-box domain-containing protein1.8e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        +DEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EAL GVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R WK KFVE+YEKEK RNRRTSNMRDL++ GRRRRPPYPFPVPHIIGGD+DIVPGIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

A0A1S3BZC5 F-box protein SKIP22-like1.4e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

A0A5A7TQD4 F-box protein SKIP22-like1.4e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

A0A5D3E231 F-box protein SKIP22-like1.4e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

E5GBH4 F-box family protein1.4e-9187.7Show/hide
Query:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN
        MDEKEGNPEKQVFE WK+VKDALALPLLIDICEKTGLPPPASFMLLPADVKLKI+EALPGVD+ RV CVCTELRYL SSNELWKMKFNQEFGLED VSGN
Subjt:  MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGN

Query:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR
        R+WK KFVE+YE+EK RNRRTSNMRD +S GR RRPPYPFPVPHIIGGDYDIV GIRLP Y GVPGQSLPRIPRRH  +PHYDLRGR
Subjt:  RLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR

SwissProt top hitse value%identityAlignment
A2RRT3 F-box only protein 31-A3.2e-0535.19Show/hide
Query:  PASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGL
        P S +LLP ++ ++I   LPG ++G +A VC++ R + +++ +WK +  QE+G+
Subjt:  PASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGL

O64600 F-box protein At1g703601.1e-1350Show/hide
Query:  QVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTS
        +V   W+++KD +  PLL+D+C KTGL  P  F+ LP ++K KI+E+LPGVD+G +ACV +ELR + S
Subjt:  QVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTS

Q9ZUB8 F-box protein SKIP222.4e-2439.5Show/hide
Query:  DEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG------LED
        +E   +  ++VF  W++VKD L +PLLI IC+K GL PP   M LP ++KLKI+E LPGV +G +ACVCTE+RYL S N+LWK K  +E          D
Subjt:  DEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG------LED

Query:  SVSGNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRR----RPPYPFPVPHIIGG-DYDIVPGIRLPAYGGV-PGQSLPRIPRR---HGFMPHYDLRG
        SV+    WK +F   + +++L     +  R    LGRR     R    F  P IIG   +    G R+    G+ PGQS   + RR     F P  +L G
Subjt:  SVSGNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRR----RPPYPFPVPHIIGG-DYDIVPGIRLPAYGGV-PGQSLPRIPRR---HGFMPHYDLRG

Q9ZUB9 Putative F-box protein At1g237704.1e-2444.6Show/hide
Query:  EKEGNPE--KQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG--LEDSVS
        EK+G+    ++VF LW++VKD L +PLLI +C+K GL  P   MLLP ++KLKI+E LPGV +G +ACVCTE+RYL S N+LW+ K  +E    L    +
Subjt:  EKEGNPE--KQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG--LEDSVS

Query:  GNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPP
        G+  WK KF   + +++L         DL++   RR PP
Subjt:  GNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPP

Arabidopsis top hitse value%identityAlignment
AT1G23770.1 F-box family protein2.9e-2544.6Show/hide
Query:  EKEGNPE--KQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG--LEDSVS
        EK+G+    ++VF LW++VKD L +PLLI +C+K GL  P   MLLP ++KLKI+E LPGV +G +ACVCTE+RYL S N+LW+ K  +E    L    +
Subjt:  EKEGNPE--KQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG--LEDSVS

Query:  GNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPP
        G+  WK KF   + +++L         DL++   RR PP
Subjt:  GNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRRRPP

AT1G23780.1 F-box family protein1.7e-2539.5Show/hide
Query:  DEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG------LED
        +E   +  ++VF  W++VKD L +PLLI IC+K GL PP   M LP ++KLKI+E LPGV +G +ACVCTE+RYL S N+LWK K  +E          D
Subjt:  DEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFG------LED

Query:  SVSGNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRR----RPPYPFPVPHIIGG-DYDIVPGIRLPAYGGV-PGQSLPRIPRR---HGFMPHYDLRG
        SV+    WK +F   + +++L     +  R    LGRR     R    F  P IIG   +    G R+    G+ PGQS   + RR     F P  +L G
Subjt:  SVSGNRLWKPKFVEHYEKEKLRNRRTSNMRDLVSLGRRR----RPPYPFPVPHIIGG-DYDIVPGIRLPAYGGV-PGQSLPRIPRR---HGFMPHYDLRG

AT1G70360.1 F-box family protein7.9e-1550Show/hide
Query:  QVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTS
        +V   W+++KD +  PLL+D+C KTGL  P  F+ LP ++K KI+E+LPGVD+G +ACV +ELR + S
Subjt:  QVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAAAAGAAGGGAACCCAGAGAAACAAGTTTTTGAATTGTGGAAGGTAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATATCTGTGAAAAAACTGGTTT
ACCACCTCCTGCAAGCTTTATGCTACTTCCTGCTGATGTGAAGCTGAAGATTATAGAGGCTCTTCCTGGTGTGGACGTTGGAAGAGTTGCATGTGTGTGTACTGAATTGC
GTTACTTGACTTCCAGCAATGAGCTGTGGAAGATGAAGTTCAATCAAGAGTTTGGTTTGGAGGATAGTGTTTCAGGAAACAGGCTTTGGAAGCCAAAATTTGTTGAACAT
TATGAGAAAGAAAAGCTGAGAAACAGAAGAACTAGCAATATGAGGGATCTTGTTAGTTTGGGGCGGCGCCGTCGACCACCTTACCCTTTCCCAGTTCCTCATATCATTGG
GGGAGATTATGACATTGTGCCTGGTATCAGGCTCCCTGCATATGGAGGAGTTCCTGGACAATCATTACCTCGGATTCCACGGCGACACGGTTTCATGCCACATTATGATT
TGAGAGGACGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAAAAGAAGGGAACCCAGAGAAACAAGTTTTTGAATTGTGGAAGGTAGTGAAGGATGCTCTTGCATTGCCACTCTTGATTGATATCTGTGAAAAAACTGGTTT
ACCACCTCCTGCAAGCTTTATGCTACTTCCTGCTGATGTGAAGCTGAAGATTATAGAGGCTCTTCCTGGTGTGGACGTTGGAAGAGTTGCATGTGTGTGTACTGAATTGC
GTTACTTGACTTCCAGCAATGAGCTGTGGAAGATGAAGTTCAATCAAGAGTTTGGTTTGGAGGATAGTGTTTCAGGAAACAGGCTTTGGAAGCCAAAATTTGTTGAACAT
TATGAGAAAGAAAAGCTGAGAAACAGAAGAACTAGCAATATGAGGGATCTTGTTAGTTTGGGGCGGCGCCGTCGACCACCTTACCCTTTCCCAGTTCCTCATATCATTGG
GGGAGATTATGACATTGTGCCTGGTATCAGGCTCCCTGCATATGGAGGAGTTCCTGGACAATCATTACCTCGGATTCCACGGCGACACGGTTTCATGCCACATTATGATT
TGAGAGGACGATGA
Protein sequenceShow/hide protein sequence
MDEKEGNPEKQVFELWKVVKDALALPLLIDICEKTGLPPPASFMLLPADVKLKIIEALPGVDVGRVACVCTELRYLTSSNELWKMKFNQEFGLEDSVSGNRLWKPKFVEH
YEKEKLRNRRTSNMRDLVSLGRRRRPPYPFPVPHIIGGDYDIVPGIRLPAYGGVPGQSLPRIPRRHGFMPHYDLRGR