; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019232 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019232
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRadical SAM superfamily protein isoform 1
Genome locationChr04:19017171..19017470
RNA-Seq ExpressionHG10019232
SyntenyHG10019232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]1.1e-3071.68Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEF-SNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQV
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL   N+ESSHRRTRSD+QPPTFEF   QR + ELTHSRSVNK A          FE +F SY  QV
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEF-SNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQV

Query:  SNKPTY-YVNPPR
        SN+P Y Y NPPR
Subjt:  SNKPTY-YVNPPR

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]8.7e-3183.15Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVSN
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLTN+ESSHRRTRSDFQPP FE+ +QRS HEL HSRSV+KGAF    SSY  QVSN
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVSN

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]8.7e-3183.15Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVSN
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLLTN+ESSHRRTRSDFQPP FE+ +QRS HEL HSRSV+KGAF    SSY  QVSN
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVSN

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]4.6e-3273.21Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVS
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL   N+ESSHRRTRSD+QPPTFEF +QRST ELTHSRSVNK A          FE +F SY  QVS
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVS

Query:  NKPTY-YVNPPR
        N+P Y Y NP R
Subjt:  NKPTY-YVNPPR

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]1.6e-3779.82Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL-TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVSN
        MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL TN+ESSHRRTRSDFQPP  EFS+QRSTHEL HSRSV+KGA          FE  FSSYP QV+N
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL-TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVSN

Query:  KPTYYVNPP
        KPTYY NPP
Subjt:  KPTYYVNPP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein2.2e-3273.21Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVS
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL   N+ESSHRRTRSD+QPPTFEF +QRST ELTHSRSVNK A          FE +F SY  QVS
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQVS

Query:  NKPTY-YVNPPR
        N+P Y Y NP R
Subjt:  NKPTY-YVNPPR

A0A2N9EKL5 Uncharacterized protein5.9e-1756.12Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEE----SSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFD-------FSSYPSQV
        MEGLIP+L HA+KKQ+P+++YR  S GSSRSYHLL   +    SSHRRTRS+FQPPT EF +QRS HE   S SVNK +             SYP+QV
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEE----SSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFD-------FSSYPSQV

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X25.5e-3171.68Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEF-SNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQV
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL   N+ESSHRRTRSD+QPPTFEF   QR + ELTHSRSVNK A          FE +F SY  QV
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL--TNEESSHRRTRSDFQPPTFEF-SNQRSTHELTHSRSVNKGA----------FEFDFSSYPSQV

Query:  SNKPTY-YVNPPR
        SN+P Y Y NPPR
Subjt:  SNKPTY-YVNPPR

A0A6P6AFC0 uncharacterized protein LOC1113090195.9e-1757.89Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTN-------EESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVS
        MEGLIPYL  AM+KQKP H YRS S+GSSRSYHLL         E SSHRRTRSDFQPPT EF  QRS  +   ++S N G+      +YPS+V+
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTN-------EESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVS

A0A7J7HFZ0 Uncharacterized protein5.9e-1763.29Show/hide
Query:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL----TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA
        MEGLIP L +A+KKQ+P H YR  S GS+RSYHLL    + E SSHRRTRS+FQPPT +F +QRST E +HSRS N+G+
Subjt:  MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLL----TNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein4.5e-0960.66Show/hide
Query:  MEGLIPYLFHAMKK-QKPRH-NYRSQSVGSSRSYHLL--------TNEESSHRRTRSDFQP
        MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L        + + SSHRRTRSD+ P
Subjt:  MEGLIPYLFHAMKK-QKPRH-NYRSQSVGSSRSYHLL--------TNEESSHRRTRSDFQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCATAACTATAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTCTTGACCAA
TGAAGAGTCGTCGCACCGACGAACACGATCGGATTTTCAGCCACCGACGTTTGAGTTCTCGAACCAACGATCGACACATGAGTTAACACATTCTCGTAGCGTTAACAAAG
GCGCCTTTGAATTTGATTTCTCTTCTTATCCTAGTCAGGTTTCAAATAAGCCTACTTATTATGTTAATCCTCCTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCTTAATTCCTTATCTTTTCCATGCAATGAAGAAGCAAAAGCCACGCCATAACTATAGAAGCCAATCCGTAGGTTCAAGCAGGAGCTACCATCTCTTGACCAA
TGAAGAGTCGTCGCACCGACGAACACGATCGGATTTTCAGCCACCGACGTTTGAGTTCTCGAACCAACGATCGACACATGAGTTAACACATTCTCGTAGCGTTAACAAAG
GCGCCTTTGAATTTGATTTCTCTTCTTATCCTAGTCAGGTTTCAAATAAGCCTACTTATTATGTTAATCCTCCTCGTTAA
Protein sequenceShow/hide protein sequence
MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLTNEESSHRRTRSDFQPPTFEFSNQRSTHELTHSRSVNKGAFEFDFSSYPSQVSNKPTYYVNPPR