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HG10019248 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019248
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncalponin homology domain-containing protein DDB_G0272472
Genome locationChr04:19178956..19179821
RNA-Seq ExpressionHG10019248
SyntenyHG10019248
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600295.1 hypothetical protein SDJN03_05528, partial [Cucurbita argyrosperma subsp. sororia]8.4e-1271.21Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDS+SAS++R N   AIDSESKKDDSGE +SASSKSGRSKF KET+QSTMH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

KAG7030955.1 hypothetical protein SDJN02_04992 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-1272.73Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDSVSAS++R N   AIDSESKKDDSGE +SASSKSGRSKF KET+QSTMH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

XP_022941676.1 uncharacterized protein LOC111446963 [Cucurbita moschata]3.8e-1272.73Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDSVSAS++R N   AIDSESKKDDSGE +SASSKSGRSKF KET+QSTMH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

XP_022992729.1 calponin homology domain-containing protein DDB_G0272472 [Cucurbita maxima]3.2e-1169.7Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDSVSAS++R N   AIDSESKKD+SGE +SASSKSGRSKF KET+QS+MH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

XP_038903669.1 uncharacterized protein LOC120090199 isoform X1 [Benincasa hispida]2.2e-1269.7Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS++LNL+SVSASKNRSN+ T IDSE+KK+DS EP+SA ++SGRSKF KETSQS MH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

TrEMBL top hitse value%identityAlignment
A0A1S3BXZ4 LOW QUALITY PROTEIN: uncharacterized protein LOC1034947951.5e-1166.67Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+ LNLDSV  ++N SN+  A+DS+SKKDDSGEP+SA SKSGRSKF KET+QS MH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

A0A5A7TM27 Uncharacterized protein1.5e-1166.67Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+ LNLDSV  ++N SN+  A+DS+SKKDDSGEP+SA SKSGRSKF KET+QS MH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

A0A6J1D550 uncharacterized protein LOC1110176961.0e-1065.15Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MD    N+DSVSAS+ R+ ++TA++SESK DDSGEP+SASSKSGRSK SKET+QST+H  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

A0A6J1FLR6 uncharacterized protein LOC1114469631.8e-1272.73Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDSVSAS++R N   AIDSESKKDDSGE +SASSKSGRSKF KET+QSTMH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

A0A6J1JYB3 calponin homology domain-containing protein DDB_G02724721.5e-1169.7Show/hide
Query:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ
        MDS+  NLDSVSAS++R N   AIDSESKKD+SGE +SASSKSGRSKF KET+QS+MH  N  T+Q
Subjt:  MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCTTTCTTGAACTTGGACTCTGTTTCAGCATCGAAAAATCGAAGTAACAAACTCACTGCTATCGATTCGGAGAGTAAGAAAGACGACTCTGGCGAGCCTAT
TTCTGCAAGCTCGAAAAGTGGAAGGAGTAAATTCTCGAAAGAGACAAGCCAATCAACAATGCACGCTAACAATTTAATCACAAATCAAGAAGCCTCCTCACAGGAAGGTT
TCCCCAGTCAAGTGGTTCCCACGCAAGAACGTGGACTCTTACTTGAAGAGAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCTTTCTTGAACTTGGACTCTGTTTCAGCATCGAAAAATCGAAGTAACAAACTCACTGCTATCGATTCGGAGAGTAAGAAAGACGACTCTGGCGAGCCTAT
TTCTGCAAGCTCGAAAAGTGGAAGGAGTAAATTCTCGAAAGAGACAAGCCAATCAACAATGCACGCTAACAATTTAATCACAAATCAAGAAGCCTCCTCACAGGAAGGTT
TCCCCAGTCAAGTGGTTCCCACGCAAGAACGTGGACTCTTACTTGAAGAGAAAAATTAA
Protein sequenceShow/hide protein sequence
MDSSFLNLDSVSASKNRSNKLTAIDSESKKDDSGEPISASSKSGRSKFSKETSQSTMHANNLITNQEASSQEGFPSQVVPTQERGLLLEEKN