; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019267 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019267
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF12P19.7, putative isoform 2
Genome locationChr04:19514583..19521112
RNA-Seq ExpressionHG10019267
SyntenyHG10019267
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044364.1 F12P19.7, putative isoform 2 [Cucumis melo var. makuwa]9.3e-6862.2Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -------LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQ
               ++ LLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA Q
Subjt:  -------LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQ

Query:  IYTA-----------------------------GIWSFTKDAYKLK
        IYTA                             G+WSFTKDAYKLK
Subjt:  IYTA-----------------------------GIWSFTKDAYKLK

TYK29493.1 uncharacterized protein E5676_scaffold655G00920 [Cucumis melo var. makuwa]4.2e-6865.65Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQLLGLL-----------------------------GSLK
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ    +                             GSLK
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQLLGLL-----------------------------GSLK

Query:  GITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA------------
        GITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA            
Subjt:  GITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA------------

Query:  -----------------GIWSFTKDAYKLK
                         G+WSFTKDAYKLK
Subjt:  -----------------GIWSFTKDAYKLK

XP_004152259.1 uncharacterized protein LOC101208429 isoform X1 [Cucumis sativus]1.3e-6964.58Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  +TAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--
         LLGLLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHF+ADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA  
Subjt:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--

Query:  ---------------------------GIWSFTKDAYKLK
                                   GIWSFTKDAYKLK
Subjt:  ---------------------------GIWSFTKDAYKLK

XP_008454366.1 PREDICTED: uncharacterized protein LOC103494786 [Cucumis melo]2.0e-7065.15Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--
         LLGLLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA  
Subjt:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--

Query:  ---------------------------GIWSFTKDAYKLKV
                                   G+WSFTKDAYKLKV
Subjt:  ---------------------------GIWSFTKDAYKLKV

XP_038903360.1 uncharacterized protein LOC120089977 [Benincasa hispida]1.1e-7367.62Show/hide
Query:  MNALVVFLFA-VWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ----------------------------------
        MNALVVFL A VWFP+IGGVTAASTA VKVGNVSKVEDA NFRIYYGQSFKVIKNA+DGKSYLLIQ                                  
Subjt:  MNALVVFLFA-VWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ----------------------------------

Query:  -----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIY
             LLGLLGSLKGITSE+VTSECVLKQYEKG+IQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIK LGAFANLEARATQIY
Subjt:  -----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIY

Query:  TA-----------------------------GIWSFTKDAYKLK
        +A                             GIWSFTKDAYKLK
Subjt:  TA-----------------------------GIWSFTKDAYKLK

TrEMBL top hitse value%identityAlignment
A0A0A0KV51 Uncharacterized protein6.3e-7064.58Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  +TAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--
         LLGLLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHF+ADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA  
Subjt:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--

Query:  ---------------------------GIWSFTKDAYKLK
                                   GIWSFTKDAYKLK
Subjt:  ---------------------------GIWSFTKDAYKLK

A0A1S3BXY4 uncharacterized protein LOC1034947869.7e-7165.15Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--
         LLGLLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA  
Subjt:  -LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA--

Query:  ---------------------------GIWSFTKDAYKLKV
                                   G+WSFTKDAYKLKV
Subjt:  ---------------------------GIWSFTKDAYKLKV

A0A5A7TMJ6 F12P19.7, putative isoform 24.5e-6862.2Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ                                      
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ--------------------------------------

Query:  -------LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQ
               ++ LLGSLKGITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA Q
Subjt:  -------LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQ

Query:  IYTA-----------------------------GIWSFTKDAYKLK
        IYTA                             G+WSFTKDAYKLK
Subjt:  IYTA-----------------------------GIWSFTKDAYKLK

A0A5D3E0B2 Uncharacterized protein2.0e-6865.65Show/hide
Query:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQLLGLL-----------------------------GSLK
        LV+FLFAVWFP I  VTAAST AVKVGNVSKVEDA NFRIYYGQSFKVIKN++DGKSYLLIQ    +                             GSLK
Subjt:  LVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQLLGLL-----------------------------GSLK

Query:  GITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA------------
        GITSE VTSECVLKQYEKGEIQIINKTE QQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQ+AEWIK LGAFAN+E RA QIYTA            
Subjt:  GITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTA------------

Query:  -----------------GIWSFTKDAYKLK
                         G+WSFTKDAYKLK
Subjt:  -----------------GIWSFTKDAYKLK

A0A6J1F572 uncharacterized protein LOC1114422353.2e-6662.14Show/hide
Query:  MNALVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ-----------------------------------
        M ALVV L AVWFP+ GG      AAVKVGNVSKVEDA NFRIYYGQSFKVIKNA+DG SYLLIQ                                   
Subjt:  MNALVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ-----------------------------------

Query:  ----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYT
            LLGL+G+LK ITSE+VTSECVLKQYEKGEIQIINKTE QQLAQFAAHF+ADVDQPQSCNFATFLPSSEDTPLQRAEWIK LG FANLEARATQIY+
Subjt:  ----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYT

Query:  A-----------------------------GIWSFTKDAYKLK
        A                             G+WSFTKDAYKLK
Subjt:  A-----------------------------GIWSFTKDAYKLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65900.1 unknown protein2.4e-4543.9Show/hide
Query:  VVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ---------------------------------------
        ++ L  +W  ++  ++  ++  VKVG +SKVEDA NF IYYGQ+FKVIKNA+DGKSYLLIQ                                       
Subjt:  VVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQ---------------------------------------

Query:  ----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIY-
            LLGLLGSLKGITS++V S C+LK  E GE+  ++K E  QL+QFAAHF++D DQPQ+CNFA F P SE TPLQRAEWIK LGAF NLE +A Q+Y 
Subjt:  ----LLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFAAHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIY-

Query:  -------------------------------TAGIWSFTKDAYKLK
                                         G+WSFTK+++KLK
Subjt:  -------------------------------TAGIWSFTKDAYKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCATTGGTGGTGTTTCTCTTCGCCGTCTGGTTTCCGCTTATTGGCGGAGTGACGGCGGCTTCTACGGCGGCGGTGAAGGTCGGGAATGTTTCGAAAGTTGAAGA
TGCGTTTAATTTCAGGATTTATTATGGACAGTCGTTTAAAGTTATTAAGAACGCCGTTGATGGCAAGAGCTACCTTCTCATTCAGCTTCTAGGGTTATTAGGAAGCTTGA
AGGGCATAACGTCGGAGAAGGTGACGTCAGAATGCGTATTAAAGCAATACGAAAAAGGAGAAATTCAGATTATAAATAAAACGGAAATCCAACAGCTGGCACAGTTTGCG
GCTCACTTCGTTGCTGACGTGGACCAACCACAGTCCTGCAATTTTGCCACGTTTCTTCCTTCCTCCGAGGATACGCCTTTGCAAAGAGCAGAGTGGATAAAGTTATTGGG
AGCTTTTGCAAACCTGGAGGCAAGAGCCACTCAAATTTACACTGCGGGCATATGGTCTTTCACAAAGGACGCCTACAAGCTTAAGGTAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGCATTGGTGGTGTTTCTCTTCGCCGTCTGGTTTCCGCTTATTGGCGGAGTGACGGCGGCTTCTACGGCGGCGGTGAAGGTCGGGAATGTTTCGAAAGTTGAAGA
TGCGTTTAATTTCAGGATTTATTATGGACAGTCGTTTAAAGTTATTAAGAACGCCGTTGATGGCAAGAGCTACCTTCTCATTCAGCTTCTAGGGTTATTAGGAAGCTTGA
AGGGCATAACGTCGGAGAAGGTGACGTCAGAATGCGTATTAAAGCAATACGAAAAAGGAGAAATTCAGATTATAAATAAAACGGAAATCCAACAGCTGGCACAGTTTGCG
GCTCACTTCGTTGCTGACGTGGACCAACCACAGTCCTGCAATTTTGCCACGTTTCTTCCTTCCTCCGAGGATACGCCTTTGCAAAGAGCAGAGTGGATAAAGTTATTGGG
AGCTTTTGCAAACCTGGAGGCAAGAGCCACTCAAATTTACACTGCGGGCATATGGTCTTTCACAAAGGACGCCTACAAGCTTAAGGTAAGCTAA
Protein sequenceShow/hide protein sequence
MNALVVFLFAVWFPLIGGVTAASTAAVKVGNVSKVEDAFNFRIYYGQSFKVIKNAVDGKSYLLIQLLGLLGSLKGITSEKVTSECVLKQYEKGEIQIINKTEIQQLAQFA
AHFVADVDQPQSCNFATFLPSSEDTPLQRAEWIKLLGAFANLEARATQIYTAGIWSFTKDAYKLKVS