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HG10019293 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019293
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like
Genome locationChr04:19912360..19912726
RNA-Seq ExpressionHG10019293
SyntenyHG10019293
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044385.1 protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa]1.1e-2074.7Show/hide
Query:  SFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        SFS++  +STLFRRGYA A  EGVAARI  +M KKEES+R   EK   SWVPDPVTGYYRPENC AE+DAADLRAMLLNPTTK
Subjt:  SFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

KAG7036659.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1963.92Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAV-------PEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        MA SFS+VKI S         TLFRRGYAAV        +GVAARIG      ++V++TEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAV-------PEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_011652940.1 late embryogenesis abundant protein Lea5-A [Cucumis sativus]1.8e-2168.24Show/hide
Query:  MAPSFSSVKIVSTLFRRGYAAVPEGVAARIGGMM-KKEESV---RSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        M   FS++  +S LFRRGYA  PEGVAAR+GG+M KKEES+   R  +  SWVPDPVTGYYRPENC AE+DAADLRAMLLN  TK
Subjt:  MAPSFSSVKIVSTLFRRGYAAVPEGVAARIGGMM-KKEESV---RSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_022949199.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]3.3e-2068.13Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGY-AAVPEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        MA SFS+VKI S         TLFRRGY AA P+ VAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  MAPSFSSVKIVS---------TLFRRGY-AAVPEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

XP_023525742.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]2.1e-1963.92Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAV-------PEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        MA SFS+VKI S         T+FRRGYAAV        +GVAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAV-------PEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

TrEMBL top hitse value%identityAlignment
A0A0A0KTB8 Uncharacterized protein8.5e-2268.24Show/hide
Query:  MAPSFSSVKIVSTLFRRGYAAVPEGVAARIGGMM-KKEESV---RSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        M   FS++  +S LFRRGYA  PEGVAAR+GG+M KKEES+   R  +  SWVPDPVTGYYRPENC AE+DAADLRAMLLN  TK
Subjt:  MAPSFSSVKIVSTLFRRGYAAVPEGVAARIGGMM-KKEESV---RSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A1S3BZK3 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.8e-1972.62Show/hide
Query:  PSFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        P  SS   +STLFRRGYA A  EGVAARI  +M KKEES+R   EK   SWVPDPVTGYYRPENC AE+DAADLRAMLLNP TK
Subjt:  PSFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A5A7TSN1 Protein SENESCENCE-ASSOCIATED protein 215.5e-2174.7Show/hide
Query:  SFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        SFS++  +STLFRRGYA A  EGVAARI  +M KKEES+R   EK   SWVPDPVTGYYRPENC AE+DAADLRAMLLNPTTK
Subjt:  SFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A5D3E0D0 SENESCENCE-ASSOCIATED GENE 21 protein1.8e-1972.62Show/hide
Query:  PSFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        P  SS   +STLFRRGYA A  EGVAARI  +M KKEES+R   EK   SWVPDPVTGYYRPENC AE+DAADLRAMLLNP TK
Subjt:  PSFSSVKIVSTLFRRGYA-AVPEGVAARIGGMM-KKEESVR-STEK--GSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

A0A6J1GC45 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.6e-2068.13Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGY-AAVPEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        MA SFS+VKI S         TLFRRGY AA P+ VAARIG      ++V+STEK SWVPDPVTGYYRPENCAAEIDAADLRAMLL  T K
Subjt:  MAPSFSSVKIVS---------TLFRRGY-AAVPEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG21.7e-1148.94Show/hide
Query:  MAPSFSSVKIVSTLF---------RRGYAAVPEGV------AARIGGMM---KKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLL
        MA SF++VK++S L          R G+AA            A IGG M     EE VR  EK SWVPDPVTGYYRPEN   EID AD+RA +L
Subjt:  MAPSFSSVKIVSTLF---------RRGYAAVPEGV------AARIGGMM---KKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLL

P46521 Late embryogenesis abundant protein Lea5-A1.0e-1144.44Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVA----ARIGGMMKKEESVRSTEKGS---------WVPDPVTGYYRPENCAAEIDAADLRAMLLN
        MA S SS K +          ++ RRGY+  P         R G M K E      E  S         W PDPVTGYYRPENC AEIDAADLR M+LN
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVA----ARIGGMMKKEESVRSTEKGS---------WVPDPVTGYYRPENCAAEIDAADLRAMLLN

P46522 Late embryogenesis abundant protein Lea5-D1.3e-1145.45Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVA----ARIGGMMK-------KEESVRSTE--KGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        MA S SS K++          ++ RRGY+  P         R G M K       KE S   T     +W PDPVTGYYRPENC AEIDAA+LR MLLN
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVA----ARIGGMMK-------KEESVRSTE--KGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial8.2e-1451.06Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        MA S S+VKIVS          +FRRGYAA     +   GG        +MKK+    ST+K SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

Q9SRX6 Late embryogenis abundant protein 24.5e-1250.65Show/hide
Query:  FSSVKIVSTLFRRGYAAVPEGVAARIGGM----MKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        F S K+ + +FRRG+AA  +   A  G +    MKK     S+EK  WVPDP TGYYRPE  + EID A+LRA+LLN
Subjt:  FSSVKIVSTLFRRGYAAVPEGVAARIGGM----MKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein3.2e-1350.65Show/hide
Query:  FSSVKIVSTLFRRGYAAVPEGVAARIGGM----MKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        F S K+ + +FRRG+AA  +   A  G +    MKK     S+EK  WVPDP TGYYRPE  + EID A+LRA+LLN
Subjt:  FSSVKIVSTLFRRGYAAVPEGVAARIGGM----MKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein1.0e-0639.68Show/hide
Query:  PEGVAARIGGMMKKEESVRST----EKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        PE  A  +   + K   V+      E+  W+PDP TGYYRP+N A E+DA +LR++  N   K
Subjt:  PEGVAARIGGMMKKEESVRST----EKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK

AT4G02380.1 senescence-associated gene 215.8e-1551.06Show/hide
Query:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        MA S S+VKIVS          +FRRGYAA     +   GG        +MKK+    ST+K SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  MAPSFSSVKIVS---------TLFRRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT4G02380.2 senescence-associated gene 217.9e-1252.86Show/hide
Query:  RRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN
        +RGYAA     +   GG        +MKK+    ST+K SWVPDP TGYYRPE  + EIDAA+LRA LLN
Subjt:  RRGYAAVPEGVAARIGG--------MMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLN

AT4G15910.1 drought-induced 211.4e-0839.24Show/hide
Query:  STLFRRGYAAVPEGVAA---------RIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK
        S + RR Y A  + V A         R+     ++  +    + +W PDPVTGYYRP N AAEID A+LR +LL    K
Subjt:  STLFRRGYAAVPEGVAA---------RIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCATCTTTCTCCAGCGTTAAAATCGTGTCCACTCTCTTCAGGCGTGGATACGCGGCGGTGCCAGAAGGAGTTGCGGCCAGAATTGGCGGAATGATGAAG
AAGGAAGAATCCGTAAGAAGTACAGAGAAGGGGTCGTGGGTTCCGGACCCCGTCACTGGTTATTACCGACCGGAGAACTGTGCCGCCGAGATCGACGCTGCCGAT
CTCCGGGCAATGCTACTGAACCCAACAACAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCATCTTTCTCCAGCGTTAAAATCGTGTCCACTCTCTTCAGGCGTGGATACGCGGCGGTGCCAGAAGGAGTTGCGGCCAGAATTGGCGGAATGATGAAG
AAGGAAGAATCCGTAAGAAGTACAGAGAAGGGGTCGTGGGTTCCGGACCCCGTCACTGGTTATTACCGACCGGAGAACTGTGCCGCCGAGATCGACGCTGCCGAT
CTCCGGGCAATGCTACTGAACCCAACAACAAAGTAA
Protein sequenceShow/hide protein sequence
MAPSFSSVKIVSTLFRRGYAAVPEGVAARIGGMMKKEESVRSTEKGSWVPDPVTGYYRPENCAAEIDAADLRAMLLNPTTK