; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019315 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019315
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionneuronal acetylcholine receptor subunit alpha-2-like
Genome locationChr04:20225221..20225727
RNA-Seq ExpressionHG10019315
SyntenyHG10019315
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581289.1 hypothetical protein SDJN03_21291, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3353.49Show/hide
Query:  MSITKCYAVRRAWKILRQWKFHTHRR---PFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF
        MS TK  A RRA K LR WK HTHRR    F VDFR + RFI RL+HP  TPL P+ AERQFSFND PI HLK HRRPP +                   
Subjt:  MSITKCYAVRRAWKILRQWKFHTHRR---PFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF

Query:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
                                CDYE EEEEEE+GID KAEKFIKMFYEEM++Q QVSYL  D FSDADE
Subjt:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
XP_008454304.1 PREDICTED: neuronal acetylcholine receptor subunit alpha-2-like [Cucumis melo]1.6e-4566.47Show/hide
Query:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD
        MSI TK + VR+ WKIL        RR F VDFRPLRRFI R+VH   TPLP HYAERQFSFNDTPI    FHRRPPSASA  +F IPRFSCINPKVEF+
Subjt:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD

Query:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
           +    ++++ E E        + EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLRFDEFSD DE
Subjt:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
XP_011652950.1 uncharacterized protein LOC105435158 [Cucumis sativus]3.2e-5775Show/hide
Query:  TKCYAVRRAWK-ILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFH-RRPPSASAALFHIPRFSCINPKVEFD-YE
        T+ + VR+AWK ILRQWK H+HRR F VDFRPLRRFI R++HP  TPLPPHYAERQFSFNDTPIFHLKFH RR PSASAALF IPRFSCINPKVEF+ YE
Subjt:  TKCYAVRRAWK-ILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFH-RRPPSASAALFHIPRFSCINPKVEFD-YE

Query:  FESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
                 D E ERR      + EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLRFDEFSD +E
Subjt:  FESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
XP_022934217.1 uncharacterized protein LOC111441455 [Cucurbita moschata]3.2e-3353.49Show/hide
Query:  MSITKCYAVRRAWKILRQWKFHTH---RRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF
        MS TK  A RRA K LR WK HTH   RR F VDFR + RFI RL+HP  TPL P+ AERQFSFND PI HLK HRRPP +                   
Subjt:  MSITKCYAVRRAWKILRQWKFHTH---RRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF

Query:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
                                CDYE EEEEEE+GID KAEKFIKMFYEEM++Q QVSYL  D FSDADE
Subjt:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
XP_038906165.1 uncharacterized protein LOC120092045 [Benincasa hispida]9.1e-7383.62Show/hide
Query:  MSITKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLP----PHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVE
        MS TKC A RR WKILRQ KFHTHRRPF VDFRPLRRFI RLVH ISTP P    PHY ERQFSFNDTPIFHLKFHR PPSASAALFH PRFSCINPKVE
Subjt:  MSITKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLP----PHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVE

Query:  FDYEFESRVVDDDDGERERRRLGGTCDY-----EEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
        FDYEFESRVVDDDDG  ER RLGGTC Y     EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLR DEF D DE
Subjt:  FDYEFESRVVDDDDGERERRRLGGTCDY-----EEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
TrEMBL top hitse value%identityAlignment
A0A0A0KYA9 Uncharacterized protein1.5e-5775Show/hide
Query:  TKCYAVRRAWK-ILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFH-RRPPSASAALFHIPRFSCINPKVEFD-YE
        T+ + VR+AWK ILRQWK H+HRR F VDFRPLRRFI R++HP  TPLPPHYAERQFSFNDTPIFHLKFH RR PSASAALF IPRFSCINPKVEF+ YE
Subjt:  TKCYAVRRAWK-ILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFH-RRPPSASAALFHIPRFSCINPKVEFD-YE

Query:  FESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
                 D E ERR      + EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLRFDEFSD +E
Subjt:  FESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
A0A1S3BZI3 neuronal acetylcholine receptor subunit alpha-2-like7.9e-4666.47Show/hide
Query:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD
        MSI TK + VR+ WKIL        RR F VDFRPLRRFI R+VH   TPLP HYAERQFSFNDTPI    FHRRPPSASA  +F IPRFSCINPKVEF+
Subjt:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD

Query:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
           +    ++++ E E        + EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLRFDEFSD DE
Subjt:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
A0A5B7BSJ9 Uncharacterized protein7.9e-2240.59Show/hide
Query:  KCYAVRRAWKILR---QW--KFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEFDY
        K     RAW +LR    W  K    +R  +VD R L  ++  L+H        HY ER+FSF+DTPI H+K   R PS+    F +P   CI P V+FD+
Subjt:  KCYAVRRAWKILR---QW--KFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEFDY

Query:  EFE-SRVVDDDDGERERRRLGGTCDYEEEEEE------EDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDE
        +FE +   ++DDG+  +  L GT D + + +E      E+GID+KAE+FI  FYE++K+QRQ SYL+++E
Subjt:  EFE-SRVVDDDDGERERRRLGGTCDYEEEEEE------EDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDE
A0A5D3E0E5 Neuronal acetylcholine receptor subunit alpha-2-like7.9e-4666.47Show/hide
Query:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD
        MSI TK + VR+ WKIL        RR F VDFRPLRRFI R+VH   TPLP HYAERQFSFNDTPI    FHRRPPSASA  +F IPRFSCINPKVEF+
Subjt:  MSI-TKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASA-ALFHIPRFSCINPKVEFD

Query:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
           +    ++++ E E        + EEEEEEEDGIDLKAEKFIKMFYEEMKMQ QVSYLRFDEFSD DE
Subjt:  YEFESRVVDDDDGERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
A0A6J1F231 uncharacterized protein LOC1114414551.5e-3353.49Show/hide
Query:  MSITKCYAVRRAWKILRQWKFHTH---RRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF
        MS TK  A RRA K LR WK HTH   RR F VDFR + RFI RL+HP  TPL P+ AERQFSFND PI HLK HRRPP +                   
Subjt:  MSITKCYAVRRAWKILRQWKFHTH---RRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEF

Query:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
                                CDYE EEEEEE+GID KAEKFIKMFYEEM++Q QVSYL  D FSDADE
Subjt:  DYEFESRVVDDDDGERERRRLGGTCDYE-EEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G02170.1 unknown protein1.3e-1642.61Show/hide
Query:  HYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEFDYEFESRVVDDDDGERERRRLGGTCDYEEE-EEEEDGIDLKAEKFIKMFYEEMKM
        +Y ERQ SF++TP+F++K     P++S     +P   C  P V+FDY+FE   +D  D   E +  G    Y+E   EEE G+D++AE+FI  FYE++K+
Subjt:  HYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEFDYEFESRVVDDDDGERERRRLGGTCDYEEE-EEEEDGIDLKAEKFIKMFYEEMKM

Query:  QRQVSYLRFDEFSDA
        QRQVSYL++ + +DA
Subjt:  QRQVSYLRFDEFSDA
AT5G38700.1 unknown protein1.2e-1735.56Show/hide
Query:  TKCYAVRRAWKILRQ---W--KFHTHRRPFLVDFRPL-RRFINRLVHPISTP---LPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPK
        ++  A +RAW ++R    W  K    +R  + + R L  + +  L H  S         Y E+Q SF++TPIF++K HR     ++  F +P   CI   
Subjt:  TKCYAVRRAWKILRQ---W--KFHTHRRPFLVDFRPL-RRFINRLVHPISTP---LPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPK

Query:  VEFDYEFE-SRVVDDDDGERERRRLGGTCDY--------EEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSD
         +FDY+FE     DD D  R      G+C+         ++EEEEE G+D++AE+FI  FYE+MK+QRQ+SYL++ E +D
Subjt:  VEFDYEFE-SRVVDDDDGERERRRLGGTCDY--------EEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCACTAAATGCTATGCTGTTCGCAGAGCATGGAAAATCCTACGCCAATGGAAATTTCACACCCACCGCCGCCCCTTCCTGGTGGATTTCCGCCCCCTTCGGCG
CTTCATCAACCGACTCGTTCACCCAATTTCAACTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTTCACCTGAAATTCCACCGTC
GTCCGCCGTCTGCATCGGCAGCCCTGTTCCACATCCCGAGGTTCTCGTGCATAAACCCCAAGGTTGAGTTTGATTACGAGTTTGAGAGCCGTGTTGTTGATGACGACGAT
GGTGAAAGGGAGCGGCGGCGATTGGGCGGCACGTGTGATTATGAAGAGGAGGAGGAAGAAGAAGATGGGATTGATTTGAAAGCGGAGAAGTTTATAAAAATGTTTTATGA
GGAAATGAAGATGCAGAGACAGGTCTCGTATTTGCGATTCGATGAGTTTTCTGATGCTGATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCACTAAATGCTATGCTGTTCGCAGAGCATGGAAAATCCTACGCCAATGGAAATTTCACACCCACCGCCGCCCCTTCCTGGTGGATTTCCGCCCCCTTCGGCG
CTTCATCAACCGACTCGTTCACCCAATTTCAACTCCTCTCCCCCCACATTATGCAGAGCGTCAATTCTCTTTCAACGACACCCCCATTTTTCACCTGAAATTCCACCGTC
GTCCGCCGTCTGCATCGGCAGCCCTGTTCCACATCCCGAGGTTCTCGTGCATAAACCCCAAGGTTGAGTTTGATTACGAGTTTGAGAGCCGTGTTGTTGATGACGACGAT
GGTGAAAGGGAGCGGCGGCGATTGGGCGGCACGTGTGATTATGAAGAGGAGGAGGAAGAAGAAGATGGGATTGATTTGAAAGCGGAGAAGTTTATAAAAATGTTTTATGA
GGAAATGAAGATGCAGAGACAGGTCTCGTATTTGCGATTCGATGAGTTTTCTGATGCTGATGAGTAA
Protein sequenceShow/hide protein sequence
MSITKCYAVRRAWKILRQWKFHTHRRPFLVDFRPLRRFINRLVHPISTPLPPHYAERQFSFNDTPIFHLKFHRRPPSASAALFHIPRFSCINPKVEFDYEFESRVVDDDD
GERERRRLGGTCDYEEEEEEEDGIDLKAEKFIKMFYEEMKMQRQVSYLRFDEFSDADE