; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019323 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019323
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFn3_like domain-containing protein
Genome locationChr04:20353971..20354435
RNA-Seq ExpressionHG10019323
SyntenyHG10019323
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0031222 - arabinan catabolic process (biological process)
GO:0045493 - xylan catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0009044 - xylan 1,4-beta-xylosidase activity (molecular function)
GO:0046556 - alpha-L-arabinofuranosidase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily
IPR036962 - Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR044993 - Beta-D-xylosidase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152230.1 probable beta-D-xylosidase 2 [Cucumis sativus]1.4e-5687.31Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSI ILLSAIH G ASR+PFAC P N+  +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

XP_008454298.1 PREDICTED: probable beta-D-xylosidase 2 isoform X1 [Cucumis melo]1.5e-5889.55Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSILILLSAIH GGASR PFAC P N+A +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T+FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

XP_008454299.1 PREDICTED: probable beta-D-xylosidase 2 isoform X2 [Cucumis melo]1.5e-5889.55Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSILILLSAIH GGASR PFAC P N+A +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T+FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

XP_038899169.1 probable beta-D-xylosidase 2 [Benincasa hispida]1.1e-4872.93Show/hide
Query:  PSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT
        PS   +IL +++L +    GGA+R PFAC PK+AAAS YPFCR ++ + ERVKDLIGRLTL+EKV+LLV+NA AVPRLGIK Y+WWSEALHGVSNVGPGT
Subjt:  PSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT

Query:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
         FGG+FP ATSFPQVITT A+FNASLWEAIGRV
Subjt:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

XP_038903591.1 probable beta-D-xylosidase 2 [Benincasa hispida]1.4e-5992.54Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPS STAI SILILLSAIH GGASR+PFAC PKNAAAS+Y FCRRSL VAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAY+WWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        TTFGGEFPAATSFPQVITTAA FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

TrEMBL top hitse value%identityAlignment
A0A0A0K9I3 Fn3_like domain-containing protein5.9e-4875Show/hide
Query:  MPSTSTAILSILILLSAI--HGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVG
        M + +  I+ ILI+LSAI  HGGGA R PFAC PK+AA S YPFCR +L + ERVKDLIGRLTL+EKV+LLV+NA AVPRLGIK Y+WWSEALHGVSNVG
Subjt:  MPSTSTAILSILILLSAI--HGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVG

Query:  PGTTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        PGT FGG+FP ATSFPQVITT A+FN SLWEAIGRV
Subjt:  PGTTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

A0A0A0KYB5 Fn3_like domain-containing protein7.0e-5787.31Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSI ILLSAIH G ASR+PFAC P N+  +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

A0A1S3BZ20 probable beta-D-xylosidase 2 isoform X17.4e-5989.55Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSILILLSAIH GGASR PFAC P N+A +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T+FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

A0A1S3BZI0 probable beta-D-xylosidase 2 isoform X27.4e-5989.55Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSILILLSAIH GGASR PFAC P N+A +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T+FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

A0A5D3E0C2 Putative beta-D-xylosidase 2 isoform X17.4e-5989.55Show/hide
Query:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG
        MPSTST ILSILILLSAIH GGASR PFAC P N+A +DYPFCRRSL V ERVKDLIGRLTLEEKVKLLVSNAG VPRLGIKAYQWWSEALHGVSNVGPG
Subjt:  MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPG

Query:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
        T+FGGEFPAATSFPQVI+TAA+FNASLWEAIGRV
Subjt:  TTFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

SwissProt top hitse value%identityAlignment
A5JTQ2 Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment)5.9e-2952.71Show/hide
Query:  AILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGG
        +I  + +LL+  H  G + + FAC   KN   S Y FC  SL+V +RV DL+ RLTL+EK+  L ++A  V RLGI  Y+WWSEALHGVSN+GPGT F  
Subjt:  AILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGG

Query:  EFPAATSFPQVITTAAAFNASLWEAIGRV
          P AT+FP  I TAA+FN SL++AIG V
Subjt:  EFPAATSFPQVITTAAAFNASLWEAIGRV

A5JTQ3 Beta-xylosidase/alpha-L-arabinofuranosidase 25.9e-2953.91Show/hide
Query:  ILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGE
        +L   +LLS       + + FAC   KN A ++Y FC + L+V  RVKDL+ RLTL+EKV  LV++A  V RLGI  Y+WWSEALHGVSN+GPGT F   
Subjt:  ILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGE

Query:  FPAATSFPQVITTAAAFNASLWEAIGRV
         P ATSFP  I  AA+FNASL++ IG+V
Subjt:  FPAATSFPQVITTAAAFNASLWEAIGRV

Q94KD8 Probable beta-D-xylosidase 21.7e-3971.17Show/hide
Query:  SRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFPAATSFPQVITTAAAF
        SR  FAC  K+AA +   FC+ S+ + ERV+DLIGRLTL EKV LL + A A+PRLGIK Y+WWSEALHGVSNVGPGT FGG +PAATSFPQVITT A+F
Subjt:  SRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFPAATSFPQVITTAAAF

Query:  NASLWEAIGRV
        NASLWE+IGRV
Subjt:  NASLWEAIGRV

Q9FGY1 Beta-D-xylosidase 19.1e-3859.06Show/hide
Query:  ILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEF
        ++ ++ LL  +H   + R  FAC P N       FCR ++ +  RV+DL+GRLTL+EK++ LV+NA AVPRLGI  Y+WWSEALHG+S+VGPG  FGG F
Subjt:  ILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEF

Query:  PAATSFPQVITTAAAFNASLWEAIGRV
        P ATSFPQVITTAA+FN SLWE IGRV
Subjt:  PAATSFPQVITTAAAFNASLWEAIGRV

Q9SGZ5 Probable beta-D-xylosidase 77.0e-3049.21Show/hide
Query:  LSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFP
        L +L+LL  +HG  ++  P +C P N     Y FCR  L + +R +DL+ RLT++EK+  LV+ A  +PRLG+ AY+WWSEALHGV+  GPG  F G   
Subjt:  LSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFP

Query:  AATSFPQVITTAAAFNASLWEAIGRV
        AATSFPQVI TAA+F++  W  I +V
Subjt:  AATSFPQVITTAAAFNASLWEAIGRV

Arabidopsis top hitse value%identityAlignment
AT1G02640.1 beta-xylosidase 21.2e-4071.17Show/hide
Query:  SRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFPAATSFPQVITTAAAF
        SR  FAC  K+AA +   FC+ S+ + ERV+DLIGRLTL EKV LL + A A+PRLGIK Y+WWSEALHGVSNVGPGT FGG +PAATSFPQVITT A+F
Subjt:  SRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFPAATSFPQVITTAAAF

Query:  NASLWEAIGRV
        NASLWE+IGRV
Subjt:  NASLWEAIGRV

AT1G78060.1 Glycosyl hydrolase family protein5.0e-3149.21Show/hide
Query:  LSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFP
        L +L+LL  +HG  ++  P +C P N     Y FCR  L + +R +DL+ RLT++EK+  LV+ A  +PRLG+ AY+WWSEALHGV+  GPG  F G   
Subjt:  LSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFP

Query:  AATSFPQVITTAAAFNASLWEAIGRV
        AATSFPQVI TAA+F++  W  I +V
Subjt:  AATSFPQVITTAAAFNASLWEAIGRV

AT5G09730.1 beta-xylosidase 35.5e-3052.63Show/hide
Query:  STSTAILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT
        S ST  L  ++ +S       S   FAC    N + +   FC   L++  RV DL+GRLTLEEK+  L S A  V RLGI +Y+WWSEALHGVSNVG G+
Subjt:  STSTAILSILILLSAIHGGGASRSPFAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT

Query:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
         F G+ P ATSFPQVI TAA+FN SL++AIG+V
Subjt:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV

AT5G49360.1 beta-xylosidase 16.5e-3959.06Show/hide
Query:  ILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEF
        ++ ++ LL  +H   + R  FAC P N       FCR ++ +  RV+DL+GRLTL+EK++ LV+NA AVPRLGI  Y+WWSEALHG+S+VGPG  FGG F
Subjt:  ILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEF

Query:  PAATSFPQVITTAAAFNASLWEAIGRV
        P ATSFPQVITTAA+FN SLWE IGRV
Subjt:  PAATSFPQVITTAAAFNASLWEAIGRV

AT5G64570.1 beta-D-xylosidase 49.4e-3051.13Show/hide
Query:  TSTAILSILILLSAIHGGGASRSP-FAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT
        +S  ++ +   L  ++   A  SP FAC    N + + Y FC   L +  RV DL+ RLTL+EK+  LVS A  V RLGI  Y+WWSEALHGVS +GPGT
Subjt:  TSTAILSILILLSAIHGGGASRSP-FAC-YPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGT

Query:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV
         F  + P ATSFPQVI TAA+FN SL++AIG+V
Subjt:  TFGGEFPAATSFPQVITTAAAFNASLWEAIGRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCACTTCCACCGCCATTCTTTCCATCCTCATCCTCCTCTCCGCCATCCACGGCGGCGGCGCCTCCAGGTCCCCGTTCGCCTGCTATCCAAAGAACGCGGCGGC
GAGCGACTACCCGTTCTGCCGGCGGTCGTTGGCAGTGGCGGAGAGAGTGAAGGATCTGATTGGAAGATTGACGTTGGAAGAGAAGGTGAAGCTGCTGGTGAGCAATGCCG
GAGCCGTTCCACGGCTGGGGATTAAAGCGTACCAGTGGTGGTCGGAAGCCTTGCACGGCGTCTCCAATGTCGGCCCCGGTACGACCTTCGGCGGCGAATTCCCCGCCGCT
ACCAGCTTCCCCCAGGTCATTACCACCGCCGCCGCCTTCAATGCTTCTCTGTGGGAAGCCATCGGACGGGTTTGCCTCTTTTACTTTTTCTCCATTTCACTTTTTCCGGC
CGTCGTCATTTTTGCTGAGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCCACTTCCACCGCCATTCTTTCCATCCTCATCCTCCTCTCCGCCATCCACGGCGGCGGCGCCTCCAGGTCCCCGTTCGCCTGCTATCCAAAGAACGCGGCGGC
GAGCGACTACCCGTTCTGCCGGCGGTCGTTGGCAGTGGCGGAGAGAGTGAAGGATCTGATTGGAAGATTGACGTTGGAAGAGAAGGTGAAGCTGCTGGTGAGCAATGCCG
GAGCCGTTCCACGGCTGGGGATTAAAGCGTACCAGTGGTGGTCGGAAGCCTTGCACGGCGTCTCCAATGTCGGCCCCGGTACGACCTTCGGCGGCGAATTCCCCGCCGCT
ACCAGCTTCCCCCAGGTCATTACCACCGCCGCCGCCTTCAATGCTTCTCTGTGGGAAGCCATCGGACGGGTTTGCCTCTTTTACTTTTTCTCCATTTCACTTTTTCCGGC
CGTCGTCATTTTTGCTGAGCTGTAA
Protein sequenceShow/hide protein sequence
MPSTSTAILSILILLSAIHGGGASRSPFACYPKNAAASDYPFCRRSLAVAERVKDLIGRLTLEEKVKLLVSNAGAVPRLGIKAYQWWSEALHGVSNVGPGTTFGGEFPAA
TSFPQVITTAAAFNASLWEAIGRVCLFYFFSISLFPAVVIFAEL