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HG10019326 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019326
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionBromo domain-containing protein
Genome locationChr04:20402556..20402843
RNA-Seq ExpressionHG10019326
SyntenyHG10019326
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4267891.1 unnamed protein product [Prunus armeniaca]6.6e-1249.49Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   E++ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
CAB4287154.1 unnamed protein product [Prunus armeniaca]3.9e-1250.51Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   EV+ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
CAB4298316.1 unnamed protein product [Prunus armeniaca]3.0e-1250.51Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   EV+ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]1.7e-1274Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQ
        MN+D+IFV++FGPEKH  VRGYGVGV HSELFGSSS + DLER LNES++
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQ
XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]2.7e-2977.45Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQRLQESEQQRK-------IEVEALKHQMSELENRFEDRFKKMMAEMRKEFV
        MNEDE FVRVFGPEKH  V GYGVGVT SELFGSSS IRD ER LNESEQRLQE EQQRK       +EVE LK Q+SELENRFEDRF+KMMAEM K+FV
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQRLQESEQQRK-------IEVEALKHQMSELENRFEDRFKKMMAEMRKEFV

Query:  SS
        SS
Subjt:  SS
TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968288.5e-1374Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQ
        MN+D+IFV++FGPEKH  VRGYGVGV HSELFGSSS + DLER LNES++
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQ
A0A6J5TUZ6 Bromo domain-containing protein3.2e-1249.49Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   E++ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
A0A6J5TV49 Bromo domain-containing protein3.2e-1249.49Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   E++ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
A0A6J5VGW3 Bromo domain-containing protein1.9e-1250.51Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   EV+ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
A0A6J5W9N9 Bromo domain-containing protein1.4e-1250.51Show/hide
Query:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
        M EDEIFV+VFGPE+  RVRGYG GVT  EL+G    SSS + +L R L ES+QR +ESEQ+   EV+ LK Q+  +E       NRFE    ++M+ M
Subjt:  MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFG----SSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELE-------NRFEDRFKKMMAEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAGGATGAGATTTTTGTACGAGTATTTGGACCGGAGAAACACGAACGTGTTCGTGGTTATGGAGTAGGTGTTACTCATTCTGAGTTGTTTGGATCATCGTCTAA
CATACGCGATCTTGAGCGTCTCCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAATTGAGGTAGAAGCACTTAAGCATCAAATGAGCGAATTAG
AAAATCGTTTTGAAGATAGATTTAAAAAAATGATGGCAGAGATGCGTAAAGAATTTGTTTCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGAGGATGAGATTTTTGTACGAGTATTTGGACCGGAGAAACACGAACGTGTTCGTGGTTATGGAGTAGGTGTTACTCATTCTGAGTTGTTTGGATCATCGTCTAA
CATACGCGATCTTGAGCGTCTCCTTAATGAGTCTGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAATTGAGGTAGAAGCACTTAAGCATCAAATGAGCGAATTAG
AAAATCGTTTTGAAGATAGATTTAAAAAAATGATGGCAGAGATGCGTAAAGAATTTGTTTCTAGTTGA
Protein sequenceShow/hide protein sequence
MNEDEIFVRVFGPEKHERVRGYGVGVTHSELFGSSSNIRDLERLLNESEQRLQESEQQRKIEVEALKHQMSELENRFEDRFKKMMAEMRKEFVSS