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HG10019354 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019354
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein, putative
Genome locationChr04:20777576..20778180
RNA-Seq ExpressionHG10019354
SyntenyHG10019354
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012062.1 hypothetical protein SDJN02_26970, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1170.91Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFF+FHST         TKDFHG A  RSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
XP_004139828.2 uncharacterized protein LOC101213346 [Cucumis sativus]6.4e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
XP_008447121.1 PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo]6.4e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
XP_022968874.1 uncharacterized protein LOC111468053 [Cucurbita maxima]3.2e-1170.91Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFF+FHST         TKDFHG A  RSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
XP_038888007.1 uncharacterized protein LOC120077946 [Benincasa hispida]6.4e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
TrEMBL top hitse value%identityAlignment
A0A0A0K424 Uncharacterized protein3.1e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
A0A1S3BHA3 uncharacterized protein LOC1034896443.1e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
A0A5A7U7C4 Putative transmembrane protein3.1e-1274.55Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFFVFHST         TKDFHG A KRSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
A0A6J1GKU6 uncharacterized protein LOC1114548731.5e-1170.91Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFF+FHST         TKDFHG A  RSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
A0A6J1I0X4 uncharacterized protein LOC1114680531.5e-1170.91Show/hide
Query:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
        M HIFFF+FHST         TKDFHG A  RSWIP LCSLLF LGIIWAVRYKT
Subjt:  MFHIFFFVFHST---------TKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12870.1 unknown protein3.0e-0732.46Show/hide
Query:  HIFFFVFH------------STTKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT------RRMLK------PIWRSCWKGKKKTRFAVKIAVEASPMR
        +IFFF+FH            S++     +A KRSWIP LC+LL  LGIIWAVRYK+       ++L+       + R C +  KK      +  E   +R
Subjt:  HIFFFVFH------------STTKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKT------RRMLK------PIWRSCWKGKKKTRFAVKIAVEASPMR

Query:  EEKGVRRQGNEYRR
          K +R +    ++
Subjt:  EEKGVRRQGNEYRR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCACATCTTCTTCTTCGTCTTCCACTCCACGACCAAGGATTTCCATGGCGCAGCTGGTAAAAGATCATGGATTCCCTTGCTCTGTTCTCTCTTGTTTTAT
CTGGGTATCATTTGGGCGGTGAGATACAAGACAAGACGAATGTTGAAGCCCATTTGGAGAAGCTGCTGGAAAGGGAAAAAGAAGACAAGATTTGCTGTCAAAATA
GCGGTGGAAGCATCGCCAATGAGAGAAGAGAAGGGAGTGAGGAGGCAAGGCAACGAATATCGGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCACATCTTCTTCTTCGTCTTCCACTCCACGACCAAGGATTTCCATGGCGCAGCTGGTAAAAGATCATGGATTCCCTTGCTCTGTTCTCTCTTGTTTTAT
CTGGGTATCATTTGGGCGGTGAGATACAAGACAAGACGAATGTTGAAGCCCATTTGGAGAAGCTGCTGGAAAGGGAAAAAGAAGACAAGATTTGCTGTCAAAATA
GCGGTGGAAGCATCGCCAATGAGAGAAGAGAAGGGAGTGAGGAGGCAAGGCAACGAATATCGGAGGTAG
Protein sequenceShow/hide protein sequence
MFHIFFFVFHSTTKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKTRRMLKPIWRSCWKGKKKTRFAVKIAVEASPMREEKGVRRQGNEYRR