; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019386 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019386
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like protein
Genome locationChr04:21224002..21224508
RNA-Seq ExpressionHG10019386
SyntenyHG10019386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052771.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]7.1e-3357.46Show/hide
Query:  STFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAG-LPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        S  R+T+RR D ++DQSLLI+LG +  +LSR P  G   + IL+ES  +P+RIT+FPLPL+EL+DP +CH+Y  RLL Y+DL   TCDI+AK ITS++ E
Subjt:  STFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAG-LPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRG
        +LAAGN+EVKFRIVA ID +QM W ++ G+SR G
Subjt:  LLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRG

KAG6605180.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2953.06Show/hide
Query:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        +ST R++LRR D T DQ L +RLG+    +SRSP +GLPY+IL E    P+  T+FPLPLRELEDPL CH Y+V L++ L+L +++C+ IA+ ITS+V +
Subjt:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEA
          AA + + KF++VA+ID+IQM+W ++  G  RRGV+ EE VILEEA
Subjt:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEA

TYK19474.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa]3.0e-3153.75Show/hide
Query:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        ASTFR+++RR + +  QSL IRLG +   LSR PSAGLPYEIL E++ I ++   FPLPLR+LED  LC IY+V+LL+  +L  VT  II++ ITS+V E
Subjt:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES-----------RRGVVAEETVILEEAPA
        +LAAG+ + KF+IVAEIDHIQMY W ++   S           RRGVV EE V+LE  PA
Subjt:  LLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES-----------RRGVVAEETVILEEAPA

XP_038876865.1 putative RING-H2 finger protein ATL53 [Benincasa hispida]1.9e-3860.26Show/hide
Query:  TASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVR
        TASTFR++LRR+D   DQSL IRLGF+   LSRSPS+GLPYEILYE      R T FPL LR+LEDPL C  Y+ +LL  LDL AVTCDI+A+ ITSVV 
Subjt:  TASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVR

Query:  ELLAAGNVEVKFRIVAEIDHIQMYWSDQIGES-------RRGVVAEETVILEEAPA
        E+L +GN +VKF+I AEIDH+QM+W+++   S       RRG+V EE  +LEEAPA
Subjt:  ELLAAGNVEVKFRIVAEIDHIQMYWSDQIGES-------RRGVVAEETVILEEAPA

XP_038905732.1 E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]1.7e-5874.4Show/hide
Query:  MSSPGTASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVI
        MSS  TASTFRF+LRRHD +DDQSLLIRLGF+  +LSRSPSAGLPYEIL+ES  IPMRI MFPLPLR+LEDPLLC +YV+RLL+YLDL AV CDIIA  I
Subjt:  MSSPGTASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVI

Query:  TSVVRELLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRGVVAEETVILEEAP-----AETAIDVMQK
        TS + E+LAAGN EVKFRIVA+IDHI+M+W +QIGESRRGVVAEETVILEEAP     A+TAI+ +++
Subjt:  TSVVRELLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRGVVAEETVILEEAP-----AETAIDVMQK

TrEMBL top hitse value%identityAlignment
A0A0A0L2F8 Uncharacterized protein1.3e-2953.16Show/hide
Query:  TASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVR
        +ASTFR+++RR     +QSL IRLG I   LS SPSAGLPYEIL ES  IP+    FPLPLR++ED  LC IY+++LL+  +L  VT  II+K ITS+V 
Subjt:  TASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVR

Query:  ELLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES---------RRGVVAEETVILEEAP
        E+L AG+ + KF +VAEIDHI+MY W+++   S         RRGVV EE V+LE  P
Subjt:  ELLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES---------RRGVVAEETVILEEAP

A0A5D3BYE9 RING finger protein 165-like protein3.4e-3357.46Show/hide
Query:  STFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAG-LPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        S  R+T+RR D ++DQSLLI+LG +  +LSR P  G   + IL+ES  +P+RIT+FPLPL+EL+DP +CH+Y  RLL Y+DL   TCDI+AK ITS++ E
Subjt:  STFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAG-LPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRG
        +LAAGN+EVKFRIVA ID +QM W ++ G+SR G
Subjt:  LLAAGNVEVKFRIVAEIDHIQMYWSDQIGESRRG

A0A5D3D7E9 E3 ubiquitin-protein ligase RNF181-like protein1.4e-3153.75Show/hide
Query:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        ASTFR+++RR + +  QSL IRLG +   LSR PSAGLPYEIL E++ I ++   FPLPLR+LED  LC IY+V+LL+  +L  VT  II++ ITS+V E
Subjt:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES-----------RRGVVAEETVILEEAPA
        +LAAG+ + KF+IVAEIDHIQMY W ++   S           RRGVV EE V+LE  PA
Subjt:  LLAAGNVEVKFRIVAEIDHIQMY-WSDQIGES-----------RRGVVAEETVILEEAPA

A0A6J1G7R8 E3 ubiquitin-protein ligase MBR2-like6.7e-2951.7Show/hide
Query:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        +ST R++LRR D T DQ L +RLG+    +SRSP +GLPY+IL E+    +  T+FPLPLRELEDPL CH Y+V L++ L+L +++C+ IA+ ITS+V +
Subjt:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEA
          AA + ++KF++VA+ID+IQM+W ++  G  RRGV+ EE V+LEEA
Subjt:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEA

A0A6J1L191 E3 ubiquitin-protein ligase At1g63170-like1.1e-2845.91Show/hide
Query:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE
        +ST R++LRRH H  DQ L +RLG+    +S+SPSAGLPY+IL E+ + P+   +FPLPLRELEDPL CH Y+V L++ L+L +++C+ I + ITS+V +
Subjt:  ASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRE

Query:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEAPAETAIDVMQKG
          AA + + KF++V +ID+IQM+W ++  G  RRGV+ EE ++L++A     +     G
Subjt:  LLAAGNVEVKFRIVAEIDHIQMYWSDQI-GESRRGVVAEETVILEEAPAETAIDVMQKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCCGGAACCGCTTCCACCTTCCGCTTCACTCTCCGCCGCCACGACCACACCGACGATCAATCTCTCCTAATTCGTTTGGGCTTTATACAACATAAGCTCTC
CCGATCGCCGTCCGCTGGACTTCCGTACGAAATCCTCTACGAATCTACCATGATTCCAATGCGAATTACTATGTTCCCTCTTCCATTGCGAGAACTCGAAGATCCGTTGC
TATGCCATATTTATGTCGTTCGATTGCTCACTTACTTGGACCTCACCGCCGTAACCTGCGATATAATCGCTAAGGTTATCACGTCTGTCGTTCGTGAATTATTGGCCGCC
GGAAACGTCGAGGTTAAGTTCCGCATTGTGGCGGAAATCGATCACATCCAAATGTATTGGAGCGACCAAATCGGTGAAAGTAGGCGCGGTGTTGTGGCGGAGGAGACGGT
GATTCTGGAAGAAGCTCCGGCGGAGACGGCGATTGATGTTATGCAAAAAGGGACTATGATCGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCCGGAACCGCTTCCACCTTCCGCTTCACTCTCCGCCGCCACGACCACACCGACGATCAATCTCTCCTAATTCGTTTGGGCTTTATACAACATAAGCTCTC
CCGATCGCCGTCCGCTGGACTTCCGTACGAAATCCTCTACGAATCTACCATGATTCCAATGCGAATTACTATGTTCCCTCTTCCATTGCGAGAACTCGAAGATCCGTTGC
TATGCCATATTTATGTCGTTCGATTGCTCACTTACTTGGACCTCACCGCCGTAACCTGCGATATAATCGCTAAGGTTATCACGTCTGTCGTTCGTGAATTATTGGCCGCC
GGAAACGTCGAGGTTAAGTTCCGCATTGTGGCGGAAATCGATCACATCCAAATGTATTGGAGCGACCAAATCGGTGAAAGTAGGCGCGGTGTTGTGGCGGAGGAGACGGT
GATTCTGGAAGAAGCTCCGGCGGAGACGGCGATTGATGTTATGCAAAAAGGGACTATGATCGAATAG
Protein sequenceShow/hide protein sequence
MSSPGTASTFRFTLRRHDHTDDQSLLIRLGFIQHKLSRSPSAGLPYEILYESTMIPMRITMFPLPLRELEDPLLCHIYVVRLLTYLDLTAVTCDIIAKVITSVVRELLAA
GNVEVKFRIVAEIDHIQMYWSDQIGESRRGVVAEETVILEEAPAETAIDVMQKGTMIE