; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019387 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019387
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L44
Genome locationChr04:21226077..21226802
RNA-Seq ExpressionHG10019387
SyntenyHG10019387
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]8.2e-9175.62Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  +KPS IAPRNRRT SLTFRFKKSSATVPVD A PSHDELS SP+FKKPPPL LI P+AP V GEIVVDSG
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI
         + +KPSQTRKKPESTQSNFT +KLSP +K AA LHSV+ PSQLL RQKD K+SVS+HLPAAVATT+P+FSD +KP PK  TN P KNLDRVI++VMVAI
Subjt:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI

Query:  VVLWGRLCSILCTVALFYLGRRLRSEVE-PDGGGRGGFGGIS
        +VLWGRLC+ILCT ALFYLGRR+RSE+E   GGGRGGFGG S
Subjt:  VVLWGRLCSILCTVALFYLGRRLRSEVE-PDGGGRGGFGGIS

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]3.4e-6061.76Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI
        MAE+S+K+ PSK  LHFLLRCF SSPK+ T+K       + R  S  FRFKKSSATVP+D AVP       D+ S SPEFKKPPP PLI+ RAP V  +I
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI

Query:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI
        V     + IKPSQT KK EST+     + L+PAK+TAALLHS++LPS+ LNRQKDLKK+VS HL +AV T  P+ S+R KPA K P NSPAK LD +IVI
Subjt:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI

Query:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG
        V VAIVVLWG+LC+ILCT ALFY  RRLRSE E +GGG
Subjt:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]6.1e-8674.47Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MA+SS+ IPPSKS LHFL  CFRSS KL T+K S IAPR RRT S TFRFKKSSATVPVD A PSHDELS  PEFKK PPL  I P+AP VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI
           +KPSQTRKKP STQSNFT +KLSP +KTAALLHSV+LPSQ L RQK  KK VS HLPAAVATT+P+FSD +KP PK PT  P KN DRVI++V+VAI
Subjt:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI

Query:  VVLWGRLCSILCTVALFYLGRRLRSEVEPDGGGRG
        V+LWGRLC+ILCT ALFYLGRR+RSE+EPDGGG G
Subjt:  VVLWGRLCSILCTVALFYLGRRLRSEVEPDGGGRG

XP_022934627.1 uncharacterized protein LOC111441760 [Cucurbita moschata]9.1e-5861.45Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MAESSD     K RLHFL RCFRSSP +  QK  PIA  NRRT SL FRFKKSSATVP+DAAVP HDELSLSPEF  PPP PLI+       GEI+VDSG
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSN----FTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVA--TTAPSFSDRHKPAPKPPTNSPAKNLDRVIV
        CK IKPS+TRKK ESTQSN     T    +  KKT+  LHS          +K LKKS+S HLP A A  TT+   SDR     KPPTNSP K  D VIV
Subjt:  CKPIKPSQTRKKPESTQSN----FTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVA--TTAPSFSDRHKPAPKPPTNSPAKNLDRVIV

Query:  IVMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDG--GGRGGFGGIS
        IV VAIVVLWGRLC+ILCT ALFYL R LRS+ E D    G G FG +S
Subjt:  IVMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDG--GGRGGFGGIS

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]4.7e-6262.61Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI
        MAE+S+K+ PSK  LHFLLRCF SSPK+ T+K      R+ R  S  FRFKKSSATVP+D AVP       D+ S SPEFKKPPP PLI+ RAP V  +I
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI

Query:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI
        V     + IKPSQ  KK EST+S+F    L+PAK+TAALLHS++LPS+ LNRQKD KK+VS HL +AV T  P+ S+R KPA KPP NSPAK LD +IVI
Subjt:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI

Query:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG
        V VAIVVLWG+LC+ILCT ALFY  RRLRSE E +GGG
Subjt:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein2.9e-8674.47Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MA+SS+ IPPSKS LHFL  CFRSS KL T+K S IAPR RRT S TFRFKKSSATVPVD A PSHDELS  PEFKK PPL  I P+AP VGGEIVVDS 
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI
           +KPSQTRKKP STQSNFT +KLSP +KTAALLHSV+LPSQ L RQK  KK VS HLPAAVATT+P+FSD +KP PK PT  P KN DRVI++V+VAI
Subjt:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI

Query:  VVLWGRLCSILCTVALFYLGRRLRSEVEPDGGGRG
        V+LWGRLC+ILCT ALFYLGRR+RSE+EPDGGG G
Subjt:  VVLWGRLCSILCTVALFYLGRRLRSEVEPDGGGRG

A0A5A7UA28 60S ribosomal protein L444.0e-9175.62Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MA+SS K PPSKS   FL  CFRSS KL  +KPS IAPRNRRT SLTFRFKKSSATVPVD A PSHDELS SP+FKKPPPL LI P+AP V GEIVVDSG
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI
         + +KPSQTRKKPESTQSNFT +KLSP +K AA LHSV+ PSQLL RQKD K+SVS+HLPAAVATT+P+FSD +KP PK  TN P KNLDRVI++VMVAI
Subjt:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI

Query:  VVLWGRLCSILCTVALFYLGRRLRSEVE-PDGGGRGGFGGIS
        +VLWGRLC+ILCT ALFYLGRR+RSE+E   GGGRGGFGG S
Subjt:  VVLWGRLCSILCTVALFYLGRRLRSEVE-PDGGGRGGFGGIS

A0A6J1F3C2 uncharacterized protein LOC1114417604.4e-5861.45Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MAESSD     K RLHFL RCFRSSP +  QK  PIA  NRRT SL FRFKKSSATVP+DAAVP HDELSLSPEF  PPP PLI+       GEI+VDSG
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSN----FTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVA--TTAPSFSDRHKPAPKPPTNSPAKNLDRVIV
        CK IKPS+TRKK ESTQSN     T    +  KKT+  LHS          +K LKKS+S HLP A A  TT+   SDR     KPPTNSP K  D VIV
Subjt:  CKPIKPSQTRKKPESTQSN----FTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVA--TTAPSFSDRHKPAPKPPTNSPAKNLDRVIV

Query:  IVMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDG--GGRGGFGGIS
        IV VAIVVLWGRLC+ILCT ALFYL R LRS+ E D    G G FG +S
Subjt:  IVMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDG--GGRGGFGGIS

A0A6J1GBH7 uncharacterized protein LOC1114526502.3e-6262.61Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI
        MAE+S+K+ PSK  LHFLLRCF SSPK+ T+K      R+ R  S  FRFKKSSATVP+D AVP       D+ S SPEFKKPPP PLI+ RAP V  +I
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPS-----HDELSLSPEFKKPPPLPLIRPRAPPVGGEI

Query:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI
        V     + IKPSQ  KK EST+S+F    L+PAK+TAALLHS++LPS+ LNRQKD KK+VS HL +AV T  P+ S+R KPA KPP NSPAK LD +IVI
Subjt:  VVDSGCKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVI

Query:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG
        V VAIVVLWG+LC+ILCT ALFY  RRLRSE E +GGG
Subjt:  VMVAIVVLWGRLCSILCTVALFYLGRRLRSEVEPDGGG

A0A6J1IZW6 uncharacterized protein LOC1114814551.3e-5760.49Show/hide
Query:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG
        MAESSD     K RLHFL RCFRSSP +  QK   IA  NRRT SL FRFKK SATVP+DAAVP HDELS SPEF  PPP         P+ GEI+VDSG
Subjt:  MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSG

Query:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI
        CK IK S+TRKK ESTQSN T EKL PAKKT+  LHS          +K LKKS+S HLP AVA   P+ S     + K PTNSP    D V VIV VAI
Subjt:  CKPIKPSQTRKKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAI

Query:  VVLWGRLCSILCTVALFYLGRRLRSEVEPD--GGGRGGFGGIS
        VVLWGRLC+ILCT ALFYL R LRS+ E D    G G FG +S
Subjt:  VVLWGRLCSILCTVALFYLGRRLRSEVEPD--GGGRGGFGGIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCTTCCAAATCCCGACTCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATACCCAAAAGCCCTCCCCGATCGC
CCCACGGAACCGCCGGACTTTGTCGCTTACCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTTCCATCTCACGATGAACTCTCTCTTTCGCCGG
AGTTCAAGAAACCACCTCCTCTGCCGCTGATTAGACCAAGAGCGCCACCGGTCGGAGGCGAGATCGTCGTGGATTCAGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGC
AAGAAACCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGCGAAGAAAACTGCCGCGTTGTTGCACTCTGTCGCTCTTCCCTCTCAACTATTGAACCG
CCAGAAAGATTTGAAAAAATCAGTCTCTGATCATCTCCCCGCCGCCGTCGCTACCACCGCGCCGTCGTTCTCAGACCGTCATAAACCGGCGCCAAAGCCGCCGACGAATT
CTCCGGCCAAGAATTTGGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTACTGTGGGGGCGACTCTGCAGCATACTCTGCACGGTGGCGCTGTTCTACTTGGGA
CGTCGTCTGAGATCGGAAGTCGAACCGGACGGCGGCGGCAGAGGTGGTTTTGGCGGGATATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAATCTTCTGACAAAATCCCTCCTTCCAAATCCCGACTCCATTTCCTCCTCCGTTGCTTCCGATCTTCCCCCAAACTTCATACCCAAAAGCCCTCCCCGATCGC
CCCACGGAACCGCCGGACTTTGTCGCTTACCTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTCGACGCTGCCGTTCCATCTCACGATGAACTCTCTCTTTCGCCGG
AGTTCAAGAAACCACCTCCTCTGCCGCTGATTAGACCAAGAGCGCCACCGGTCGGAGGCGAGATCGTCGTGGATTCAGGCTGTAAGCCAATAAAGCCGAGTCAAACTCGC
AAGAAACCCGAGTCAACTCAGTCCAATTTCACGGCGGAGAAACTCTCGCCGGCGAAGAAAACTGCCGCGTTGTTGCACTCTGTCGCTCTTCCCTCTCAACTATTGAACCG
CCAGAAAGATTTGAAAAAATCAGTCTCTGATCATCTCCCCGCCGCCGTCGCTACCACCGCGCCGTCGTTCTCAGACCGTCATAAACCGGCGCCAAAGCCGCCGACGAATT
CTCCGGCCAAGAATTTGGATCGGGTGATTGTGATTGTTATGGTGGCGATTGTGGTACTGTGGGGGCGACTCTGCAGCATACTCTGCACGGTGGCGCTGTTCTACTTGGGA
CGTCGTCTGAGATCGGAAGTCGAACCGGACGGCGGCGGCAGAGGTGGTTTTGGCGGGATATCTTGA
Protein sequenceShow/hide protein sequence
MAESSDKIPPSKSRLHFLLRCFRSSPKLHTQKPSPIAPRNRRTLSLTFRFKKSSATVPVDAAVPSHDELSLSPEFKKPPPLPLIRPRAPPVGGEIVVDSGCKPIKPSQTR
KKPESTQSNFTAEKLSPAKKTAALLHSVALPSQLLNRQKDLKKSVSDHLPAAVATTAPSFSDRHKPAPKPPTNSPAKNLDRVIVIVMVAIVVLWGRLCSILCTVALFYLG
RRLRSEVEPDGGGRGGFGGIS