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HG10019414 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019414
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNA/RNP complex-1-interacting phosphatase, putative
Genome locationChr04:21578006..21578374
RNA-Seq ExpressionHG10019414
SyntenyHG10019414
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048367.1 putative RNA/RNP complex-1-interacting phosphatase [Cucumis melo var. makuwa]6.3e-4778.57Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPS----EEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF+  SG + VQF NR+ISPRSIA+LC HNQDPSDP+    E+ +KK QERK+MV GF QRFEKMG++LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPS----EEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQVW
        FAVYVYISQKIVCAYFLWMSMPK +W
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQVW

KAG6581569.1 hypothetical protein SDJN03_21571, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4682.26Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLC--RHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFA
        MAALSAGHRHFF        VQFGNR+ISPR I LLC   HNQDPSD SEEK KK QE KQMVPGF QR++KMGMELKEKLSPQRKGDWKDVTLMSLSFA
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLC--RHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFA

Query:  VYVYISQKIVCAYFLWMSMPKQVW
        VYVYISQKIVCAYFLWMSMPKQ+W
Subjt:  VYVYISQKIVCAYFLWMSMPKQVW

KAG6606884.1 hypothetical protein SDJN03_00226, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4680Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQ---DPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSF
        MAALSAGHR+FF    G + V F NR+ISPRSI LLC HNQ   DPSDPSEEK KK QE+KQ +PGF QRFEKMG+ELKEKLSPQRKGDWKD+TLMSLSF
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQ---DPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSF

Query:  AVYVYISQKIVCAYFLWMSMPKQVW
        AVYVYISQKIVCAYF+WMSMPKQVW
Subjt:  AVYVYISQKIVCAYFLWMSMPKQVW

KGN58582.1 hypothetical protein Csa_001602 [Cucumis sativus]8.2e-4779.37Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDP---SEEK-RKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF+ QSG +T+ F NR+ISPRSI++LC HNQDPSDP   SEEK +KK QERK+MV GF QRFEKMG++LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDP---SEEK-RKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQVW
        FAVYVYISQKIVCAYFLWM+MPK +W
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQVW

XP_022152649.1 uncharacterized protein LOC111020315 [Momordica charantia]4.8e-3975.21Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQM-VPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAV
        MAALSAGHRHFF R  G +  Q   R  SP+SI LLCRH+Q   DPSEE  K+G+ERKQ  + GF +RFEKMGMELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQM-VPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPKQ
        YVYISQKIVCAYF+WMSMPKQ
Subjt:  YVYISQKIVCAYFLWMSMPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LD14 Uncharacterized protein4.0e-4779.37Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDP---SEEK-RKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF+ QSG +T+ F NR+ISPRSI++LC HNQDPSDP   SEEK +KK QERK+MV GF QRFEKMG++LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDP---SEEK-RKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQVW
        FAVYVYISQKIVCAYFLWM+MPK +W
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQVW

A0A5D3BX35 Putative RNA/RNP complex-1-interacting phosphatase3.0e-4778.57Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPS----EEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS
        MAALSAGHRHFF+  SG + VQF NR+ISPRSIA+LC HNQDPSDP+    E+ +KK QERK+MV GF QRFEKMG++LKEKLSPQRKGDWKD+TLMSLS
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPS----EEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLS

Query:  FAVYVYISQKIVCAYFLWMSMPKQVW
        FAVYVYISQKIVCAYFLWMSMPK +W
Subjt:  FAVYVYISQKIVCAYFLWMSMPKQVW

A0A6J1DGN1 uncharacterized protein LOC1110203152.3e-3975.21Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQM-VPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAV
        MAALSAGHRHFF R  G +  Q   R  SP+SI LLCRH+Q   DPSEE  K+G+ERKQ  + GF +RFEKMGMELKEKLSPQRKGDWKDV LMSLSFAV
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQM-VPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAV

Query:  YVYISQKIVCAYFLWMSMPKQ
        YVYISQKIVCAYF+WMSMPKQ
Subjt:  YVYISQKIVCAYFLWMSMPKQ

A0A6P9E117 uncharacterized protein LOC1183445074.0e-2354.1Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAVY
        MAAL  GH    +R+    T+Q   +  SPR+  LL   +  P+D S  + KK   R+ ++PG    F K G  LKE +SPQ+KGDWKDV LMSLSFAVY
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAVY

Query:  VYISQKIVCAYFLWMSMPKQVW
        VYISQKIVCAY  WMSMPKQ W
Subjt:  VYISQKIVCAYFLWMSMPKQVW

A0A7J0FVF9 Uncharacterized protein4.0e-2351.64Show/hide
Query:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAVY
        MA LS G  HFF  ++  +  Q  ++N SPR+++ +   ++ P DPS  + KK +E+KQ++P  F+  E+ G  LK+ LSP++KGDWKD+ LMSLSFAVY
Subjt:  MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAVY

Query:  VYISQKIVCAYFLWMSMPKQVW
        VYISQKIVCAY +W+SM KQ W
Subjt:  VYISQKIVCAYFLWMSMPKQVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52070.1 unknown protein1.5e-0946.05Show/hide
Query:  KRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPKQVW
        K+K  +E + ++    +R      ++ + L P+ +KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK  W
Subjt:  KRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPKQVW

AT3G52070.2 unknown protein9.4e-0946.58Show/hide
Query:  KRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPK
        K+K  +E + ++    +R      ++ + L P+ +KGD KD+ LMSLSFAVYVYISQ +VCAYF W  +S PK
Subjt:  KRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQ-RKGDWKDVTLMSLSFAVYVYISQKIVCAYFLW--MSMPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCCTCTCCGCCGGCCACCGTCATTTCTTCCACCGACAAAGTGGCGGCTCCACCGTGCAGTTCGGAAACAGAAACATCAGCCCCAGATCGATCGCCCTCCTCTG
CCGTCATAACCAAGATCCTTCAGATCCTTCAGAAGAAAAAAGGAAGAAAGGCCAAGAAAGAAAACAGATGGTTCCTGGGTTTTTCCAGAGATTTGAGAAGATGGGTATGG
AATTGAAGGAAAAATTGAGTCCTCAGAGAAAAGGGGACTGGAAGGATGTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGTGCT
TATTTTCTTTGGATGTCAATGCCAAAACAAGTGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCCTCTCCGCCGGCCACCGTCATTTCTTCCACCGACAAAGTGGCGGCTCCACCGTGCAGTTCGGAAACAGAAACATCAGCCCCAGATCGATCGCCCTCCTCTG
CCGTCATAACCAAGATCCTTCAGATCCTTCAGAAGAAAAAAGGAAGAAAGGCCAAGAAAGAAAACAGATGGTTCCTGGGTTTTTCCAGAGATTTGAGAAGATGGGTATGG
AATTGAAGGAAAAATTGAGTCCTCAGAGAAAAGGGGACTGGAAGGATGTGACATTGATGAGCCTTTCATTTGCTGTTTATGTATATATATCTCAGAAGATTGTTTGTGCT
TATTTTCTTTGGATGTCAATGCCAAAACAAGTGTGGTAG
Protein sequenceShow/hide protein sequence
MAALSAGHRHFFHRQSGGSTVQFGNRNISPRSIALLCRHNQDPSDPSEEKRKKGQERKQMVPGFFQRFEKMGMELKEKLSPQRKGDWKDVTLMSLSFAVYVYISQKIVCA
YFLWMSMPKQVW