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HG10019418 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019418
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCellulose synthase
Genome locationChr04:21632235..21635371
RNA-Seq ExpressionHG10019418
SyntenyHG10019418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606879.1 hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5785.61Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        M V EEPILSRL+RLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPK+LEKHCRPI+HVVKV EL+GSLVERMDN+EDRVLKLC+Q+E
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ
        GEIERE+EMIMVEK+K  KPKKSFKQL+Q C TGQG R+
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ
XP_004151057.1 uncharacterized protein LOC101205386 [Cucumis sativus]5.2e-6189.51Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLD MLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPI+HVVKVAELKGSLVERMDNLEDRVLKLC+QVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ-SWS
        G++ERE++MIMVEK K+ KPK+SFKQLVQ+CMTGQGTR+ SWS
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ-SWS
XP_008461800.1 PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo]1.6e-6288.81Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPI+HVV+VAELKGSLVERMDNLEDRVLKLC+QVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
        GE+ERE++M+MV++ KK KPKKSFKQLVQQCMTGQG TR SWS
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
XP_022152667.1 uncharacterized protein LOC111020329 [Momordica charantia]8.3e-5987.05Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLDN+LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPIS+V+K+ E+KGSLV+RMDN+EDRVLKLC+Q+E
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMV-EKNKKIKPKKSFKQLVQQCMTGQGTR
        GEIERERE +MV EKNKK KPKKSFKQLVQ+CMTGQG R
Subjt:  GEIEREREMIMV-EKNKKIKPKKSFKQLVQQCMTGQGTR
XP_038905600.1 uncharacterized protein LOC120091575 [Benincasa hispida]5.6e-6393.57Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPK LEKHCRPI+HV+KVAELKGSLVERMDNLEDRVLKLCVQVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQS
        GEIEREREM++VEKNK  K KKSFKQLVQQCMTGQGTR+S
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQS
TrEMBL top hitse value%identityAlignment
A0A0A0LCD9 Uncharacterized protein2.5e-6189.51Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLD MLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPI+HVVKVAELKGSLVERMDNLEDRVLKLC+QVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ-SWS
        G++ERE++MIMVEK K+ KPK+SFKQLVQ+CMTGQGTR+ SWS
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQGTRQ-SWS
A0A1S3CFF4 uncharacterized protein LOC1035003157.8e-6388.81Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPI+HVV+VAELKGSLVERMDNLEDRVLKLC+QVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
        GE+ERE++M+MV++ KK KPKKSFKQLVQQCMTGQG TR SWS
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
A0A5A7U299 Uncharacterized protein7.8e-6388.81Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLDNMLRRLEEI+GC KSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPI+HVV+VAELKGSLVERMDNLEDRVLKLC+QVE
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
        GE+ERE++M+MV++ KK KPKKSFKQLVQQCMTGQG TR SWS
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG-TRQSWS
A0A6J1DGX0 uncharacterized protein LOC1110203294.0e-5987.05Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        MAV EEPILSRLDRLDN+LRRLEEIRGCGKSPKSSC STPSSGTLTSDYHTSSVDLSPKSLEKHCRPIS+V+K+ E+KGSLV+RMDN+EDRVLKLC+Q+E
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMV-EKNKKIKPKKSFKQLVQQCMTGQGTR
        GEIERERE +MV EKNKK KPKKSFKQLVQ+CMTGQG R
Subjt:  GEIEREREMIMV-EKNKKIKPKKSFKQLVQQCMTGQGTR
A0A6J1KAC7 uncharacterized protein LOC1114931151.1e-5686.76Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE
        M V +EPILSRL+RLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDY TSSVDLSPK+LEKHCRPI+HVVKV EL+GSLVERMDN+EDRVLKLC+Q E
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVE

Query:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG
        GEIE+E+EMIMVEK+K  KPKKSFKQLVQ CMTGQG
Subjt:  GEIEREREMIMVEKNKKIKPKKSFKQLVQQCMTGQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07985.1 Expressed protein7.8e-2352.24Show/hide
Query:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDL-SPKSLEK-HCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQ
        MAV EEPILSRLDR+D M+R+LEE++  G SP+SS  STPSSGT       SS+DL SP+S+ K HCR +  V +  E KG+L+ER++N+E++VLKLC Q
Subjt:  MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDL-SPKSLEK-HCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQ

Query:  VEGEIEREREM-IMVEKNKKI-KPKKSFKQLVQQ
         E E+E ER+     +K KK  K KK  ++LV +
Subjt:  VEGEIEREREM-IMVEKNKKI-KPKKSFKQLVQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTGGTGAGGAACCGATTCTCTCTCGGTTGGACCGGCTGGACAATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGCAAGTCTCCAAAAAGCTCGTGTGC
ATCCACTCCATCAAGTGGGACCCTGACGAGCGATTATCACACATCGTCCGTTGATCTATCACCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAGCCACGTAGTCAAAG
TCGCCGAACTCAAAGGAAGCCTCGTCGAGAGAATGGATAATTTAGAGGATAGAGTCCTCAAGCTTTGTGTACAAGTAGAGGGAGAGATAGAAAGGGAGAGGGAGATGATA
ATGGTTGAGAAGAACAAGAAGATCAAACCTAAGAAGAGCTTTAAACAACTTGTTCAACAGTGCATGACGGGTCAGGGAACACGCCAGTCGTGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTGGTGAGGAACCGATTCTCTCTCGGTTGGACCGGCTGGACAATATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGCAAGTCTCCAAAAAGCTCGTGTGC
ATCCACTCCATCAAGTGGGACCCTGACGAGCGATTATCACACATCGTCCGTTGATCTATCACCAAAAAGTCTGGAGAAGCACTGCCGTCCGATCAGCCACGTAGTCAAAG
TCGCCGAACTCAAAGGAAGCCTCGTCGAGAGAATGGATAATTTAGAGGATAGAGTCCTCAAGCTTTGTGTACAAGTAGAGGGAGAGATAGAAAGGGAGAGGGAGATGATA
ATGGTTGAGAAGAACAAGAAGATCAAACCTAAGAAGAGCTTTAAACAACTTGTTCAACAGTGCATGACGGGTCAGGGAACACGCCAGTCGTGGTCTTGA
Protein sequenceShow/hide protein sequence
MAVGEEPILSRLDRLDNMLRRLEEIRGCGKSPKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPISHVVKVAELKGSLVERMDNLEDRVLKLCVQVEGEIEREREMI
MVEKNKKIKPKKSFKQLVQQCMTGQGTRQSWS