CuGenDBv2

Gene ID	HG10019442
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	thioredoxin-like protein Clot
Genome location	Chr04:21910409..21910720
RNA-Seq Expression	HG10019442
Synteny	HG10019442
Gene Ontology terms	GO:0098869 - cellular oxidant detoxification (biological process) GO:0005637 - nuclear inner membrane (cellular component) GO:0005829 - cytosol (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004601 - peroxidase activity (molecular function) GO:0047134 - protein-disulfide reductase activity (molecular function)
InterPro domains	IPR010357 - Thioredoxin domain-containing protein 17-like domain IPR036249 - Thioredoxin-like superfamily IPR045108 - Thioredoxin domain-containing protein 17-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0048313.1 nuclear envelope integral membrane protein 1 isoform X1 [Cucumis melo var. makuwa]

6.3e-40

94.05

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Query:  CVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        CVRAEPVIYKKLEAASDD ALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  CVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

KAE8650938.1 hypothetical protein Csa_001510 [Cucumis sativus]

5.7e-41

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Query:  LVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        +  +S CVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  LVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

KAG6581598.1 O-fucosyltransferase 20, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-39

81.44

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Query:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        +  +D +  L +  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNP+HPWR+DSRFKLTGVPTLVRWE NDKISGRLEDHEAHV+ K+DALIA
Subjt:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

XP_011651794.1 thioredoxin-like protein Clot isoform X2 [Cucumis sativus]

3.3e-41

95.29

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

XP_016902770.1 PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis melo]

1.3e-40

94.12

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        DCVRAEPVIYKKLEAASDD ALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEX6 DUF953 domain-containing protein

1.6e-41

95.29

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

A0A1S4E462 thioredoxin-like protein Clot isoform X2

6.1e-41

94.12

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        DCVRAEPVIYKKLEAASDD ALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

A0A5D3CHE8 Nuclear envelope integral membrane protein 1 isoform X1

3.0e-40

94.05

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Query:  CVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK
        CVRAEPVIYKKLEAASDD ALLRAYVGDRPTWRNPQHPWR+D RFKLTGVPTLVRWEENDKISGRLEDHEAHV+NK+DALIAGK
Subjt:  CVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

A0A6J1F6J0 thioredoxin-like protein Clot

2.0e-39

81.44

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Query:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        +  +D +  L +  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNP+HPWR+DSRFKLTGVPTLVRWE NDKISGRLEDHEAHV+ K+DALIA
Subjt:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

A0A6J1J7Z3 thioredoxin-like protein Clot

2.0e-39

81.44

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Query:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        +  +D +  L +  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNP+HPWR+DSRFKLTGVPTLVRWE NDKISGRLEDHEAHV+ K+DALIA
Subjt:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

SwissProt top hits

e value

%identity

Alignment

Q5Z9Z3 Thioredoxin-like protein Clot

5.9e-25

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Query:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAAS----DDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALI
        +  RD +    +  DC  AEPVIY ++EAA+     D+ LLRAYVGD+PTWR+P HPWR D RF+LTGVPTL+RW EN   + RL D EAH+ +K+DA++
Subjt:  ILSRDLNFCLVFVSDCVRAEPVIYKKLEAAS----DDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALI

Q6DBT3 Thioredoxin domain-containing protein 17

2.8e-06

38.1

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKI
        DCV+AEPV+  +L    +    +   VGDRP W++  + ++     KLTGVPTL+R+    K+
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKI

Q9FMN4 Thioredoxin-like protein Clot

1.5e-28

66.27

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        DCVRAEPVIYK LE   +++ L+RAY GDRPTWR P HPWR+DSRFKLTGVPTLVRW + D + GRLEDH+AH+ + +  L+A
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

Arabidopsis top hits

e value

%identity

Alignment

AT5G42850.1 Thioredoxin superfamily protein

1.1e-29

66.27

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        DCVRAEPVIYK LE   +++ L+RAY GDRPTWR P HPWR+DSRFKLTGVPTLVRW + D + GRLEDH+AH+ + +  L+A
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

AT5G42850.2 Thioredoxin superfamily protein

1.1e-29

66.27

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Query:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA
        DCVRAEPVIYK LE   +++ L+RAY GDRPTWR P HPWR+DSRFKLTGVPTLVRW + D + GRLEDH+AH+ + +  L+A
Subjt:  DCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIA

Sequences

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CDS sequence

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ATGCAATCATCAATTCTCTCAAGAGATCTTAACTTCTGTTTGGTTTTTGTGTCAGACTGTGTGAGAGCTGAACCAGTCATCTACAAAAAACTGGAAGCAGCTTCAGATGA
TATCGCACTTTTGAGAGCCTATGTTGGAGATAGACCAACATGGAGGAATCCCCAGCATCCATGGAGAATGGATTCTAGGTTCAAGCTTACTGGAGTTCCAACGTTGGTTC
GATGGGAGGAGAACGATAAAATCAGTGGTCGCCTCGAAGACCATGAAGCTCACGTGGACAACAAACTTGATGCCCTTATTGCTGGTAAATAA

mRNA sequence

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Protein sequence

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MQSSILSRDLNFCLVFVSDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPQHPWRMDSRFKLTGVPTLVRWEENDKISGRLEDHEAHVDNKLDALIAGK

HG10019442 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome