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HG10019448 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019448
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmyb family transcription factor PHL5-like isoform X1
Genome locationChr04:21955446..21957921
RNA-Seq ExpressionHG10019448
SyntenyHG10019448
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650941.1 hypothetical protein Csa_001106 [Cucumis sativus]2.5e-3245.61Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMP-NDNRK-----
        MN+Y  FCPLSYLDSPFHDFYVFEG QTF E ESSFASSNTND  +HHHF I SSS HSPN QEAQHQS+C QEF+G+ CSWSCEELMP N N+K     
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMP-NDNRK-----

Query:  -----------------------------------------------------KYRISQQIQEFSEGVCS---------------------------YFN
                                                             KYRISQQIQE S+G                              +  
Subjt:  -----------------------------------------------------KYRISQQIQEFSEGVCS---------------------------YFN

Query:  PKLYQTKNVQKNLISDIEEQMKQLRGVL
          L +   VQK LIS IEEQMKQLRG L
Subjt:  PKLYQTKNVQKNLISDIEEQMKQLRGVL

TYK10646.1 protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]5.6e-3276.6Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK
        MN+YN FCPLSYLDSPFHDFYVFEG +TF E +SSFA SN NDH   HHFHISSSS HSPN Q AQHQSSC QEF+G++CSWSCEEL PN N+K
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK

XP_011652834.2 myb family transcription factor PHL5 [Cucumis sativus]2.5e-3245.61Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMP-NDNRK-----
        MN+Y  FCPLSYLDSPFHDFYVFEG QTF E ESSFASSNTND  +HHHF I SSS HSPN QEAQHQS+C QEF+G+ CSWSCEELMP N N+K     
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMP-NDNRK-----

Query:  -----------------------------------------------------KYRISQQIQEFSEGVCS---------------------------YFN
                                                             KYRISQQIQE S+G                              +  
Subjt:  -----------------------------------------------------KYRISQQIQEFSEGVCS---------------------------YFN

Query:  PKLYQTKNVQKNLISDIEEQMKQLRGVL
          L +   VQK LIS IEEQMKQLRG L
Subjt:  PKLYQTKNVQKNLISDIEEQMKQLRGVL

XP_038904769.1 myb family transcription factor PHL5-like isoform X1 [Benincasa hispida]1.6e-3949.58Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK------
        MND NGF PLSYLDSPFHDFYVFEGYQTFPETESSFASSNTND    HHFHISSSS HS N QE QHQSS  QE NGD+CS SCEELM  DN+K      
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK------

Query:  ----------------------------------------------------KYRISQQIQEFS--------------------------EGVCSYFNPK
                                                            KYRI Q IQEFS                          E V    + +
Subjt:  ----------------------------------------------------KYRISQQIQEFS--------------------------EGVCSYFNPK

Query:  --LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRND
          L +   VQKNLIS IEEQMKQLRGVLE RRKPIVFRND
Subjt:  --LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRND

XP_038904770.1 myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]1.5e-4049.79Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK------
        MND NGF PLSYLDSPFHDFYVFEGYQTFPETESSFASSNTND    HHFHISSSS HS N QE QHQSS  QE NGD+CS SCEELM  DN+K      
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK------

Query:  ----------------------------------------------------KYRISQQIQEFSEGVCSYFNPK--------------------------
                                                            KYRI Q IQEFS+G       K                          
Subjt:  ----------------------------------------------------KYRISQQIQEFSEGVCSYFNPK--------------------------

Query:  -LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRND
         L +   VQKNLIS IEEQMKQLRGVLE RRKPIVFRND
Subjt:  -LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRND

TrEMBL top hitse value%identityAlignment
A0A0A0LEY1 Uncharacterized protein1.1e-3074.75Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRKKYRIS
        MN+Y  FCPLSYLDSPFHDFYVFEG QTF E ESSFASSNTND  +HHHF I SSS HSPN QEAQHQS+C QEF+G+ CSWSCEELMP +  KK + S
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRKKYRIS

A0A5A7U415 Protein PHR1-LIKE 1-like2.7e-3276.6Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK
        MN+YN FCPLSYLDSPFHDFYVFEG +TF E +SSFA SN NDH   HHFHISSSS HSPN Q AQHQSSC QEF+G++CSWSCEEL PN N+K
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK

A0A5D3CJQ9 Protein PHR1-LIKE 1-like2.7e-3276.6Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK
        MN+YN FCPLSYLDSPFHDFYVFEG +TF E +SSFA SN NDH   HHFHISSSS HSPN Q AQHQSSC QEF+G++CSWSCEEL PN N+K
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRK

A0A6J1F3G0 myb family transcription factor PHL5-like isoform X14.8e-2942.39Show/hide
Query:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQ-EAQHQSSCCQEFNGDYCSWSCEELMPNDNRK-----
        M+D NG C LSYL SP  DFYVFEG +TF E ESSF SSNT D   H HF  SS +  S  HQ EAQ QSSCC EF+GD CSWS EELM N+N+K     
Subjt:  MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQ-EAQHQSSCCQEFNGDYCSWSCEELMPNDNRK-----

Query:  -----------------------------------------------------KYRISQQIQEFSEGVCSYFNPK-------------------------
                                                             KYRISQ I++FS+G       K                         
Subjt:  -----------------------------------------------------KYRISQQIQEFSEGVCSYFNPK-------------------------

Query:  -LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRNDEEKK
         L +   VQKNLIS IEEQMKQLRGVLE R KP+VFRN+EE+K
Subjt:  -LYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRNDEEKK

A0A6J1J569 myb family transcription factor PHL5-like isoform X24.7e-2441.03Show/hide
Query:  LSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQ-EAQHQSSCCQEFNGDYCSWSCEELMPNDNRK--------------
        LSYL SP  DFYVFEG +TF E ESSF SSNT D    HH   SS +  S  HQ EAQ QSSCCQE NGD CSWS EELM N+N+K              
Subjt:  LSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQ-EAQHQSSCCQEFNGDYCSWSCEELMPNDNRK--------------

Query:  --------------------------------------------KYRISQQIQEFSEGVCSYFNPK--------------------------LYQTKNVQ
                                                    K RISQ I++FS+G       K                          L +   VQ
Subjt:  --------------------------------------------KYRISQQIQEFSEGVCSYFNPK--------------------------LYQTKNVQ

Query:  KNLISDIEEQMKQLRGVLELRRKPIVFRNDEEKK
        KNLIS IEEQMKQLRGVLE R K +VFRN+EE+K
Subjt:  KNLISDIEEQMKQLRGVLELRRKPIVFRNDEEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTACAATGGGTTTTGTCCACTCTCTTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATATCAAACTTTTCCAGAAACGGAGTCTTCATTTGC
ATCCTCCAACACTAATGATCATCATCAACATCATCACTTTCATATCTCTTCTTCTTCTGTTCATTCACCAAACCATCAAGAAGCTCAACATCAATCAAGCTGTTGCCAAG
AGTTTAATGGTGACTACTGTTCCTGGTCATGTGAGGAGTTGATGCCAAATGATAACAGAAAGAAATATCGCATTTCTCAGCAAATTCAAGAATTTTCAGAAGGTGTATGT
TCTTATTTTAATCCTAAACTCTATCAAACTAAAAATGTTCAGAAGAATTTGATCTCAGACATTGAAGAACAAATGAAGCAACTCAGAGGAGTTTTAGAACTAAGAAGGAA
ACCCATTGTGTTTAGAAATGATGAAGAGAAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGATTACAATGGGTTTTGTCCACTCTCTTATTTGGATTCCCCATTTCATGATTTCTATGTCTTTGAAGGATATCAAACTTTTCCAGAAACGGAGTCTTCATTTGC
ATCCTCCAACACTAATGATCATCATCAACATCATCACTTTCATATCTCTTCTTCTTCTGTTCATTCACCAAACCATCAAGAAGCTCAACATCAATCAAGCTGTTGCCAAG
AGTTTAATGGTGACTACTGTTCCTGGTCATGTGAGGAGTTGATGCCAAATGATAACAGAAAGAAATATCGCATTTCTCAGCAAATTCAAGAATTTTCAGAAGGTGTATGT
TCTTATTTTAATCCTAAACTCTATCAAACTAAAAATGTTCAGAAGAATTTGATCTCAGACATTGAAGAACAAATGAAGCAACTCAGAGGAGTTTTAGAACTAAGAAGGAA
ACCCATTGTGTTTAGAAATGATGAAGAGAAAAAATAA
Protein sequenceShow/hide protein sequence
MNDYNGFCPLSYLDSPFHDFYVFEGYQTFPETESSFASSNTNDHHQHHHFHISSSSVHSPNHQEAQHQSSCCQEFNGDYCSWSCEELMPNDNRKKYRISQQIQEFSEGVC
SYFNPKLYQTKNVQKNLISDIEEQMKQLRGVLELRRKPIVFRNDEEKK