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HG10019480 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019480
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:22264686..22266017
RNA-Seq ExpressionHG10019480
SyntenyHG10019480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057401.1 hypothetical protein E6C27_scaffold280G002750 [Cucumis melo var. makuwa]2.5e-0935.76Show/hide
Query:  EKYIASPVLPATKKKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPV---KSTQQFHQSVFKIPRFNVQFVRG--VPCDNSN
        +K + S  +P   K++  L KPF + F RK TSF NSW+ +TNPDLLE+ CV+ Q+P     + V    S    + S       +V  VRG  +P D+  
Subjt:  EKYIASPVLPATKKKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPV---KSTQQFHQSVFKIPRFNVQFVRG--VPCDNSN

Query:  SPLSRQHGFDCESIVSISSEDIDCYETEVDKEEAEFVDNFGKECD-LFQEE
                   ES+VS+SSED++  E +  K   EF ++  K    LFQ E
Subjt:  SPLSRQHGFDCESIVSISSEDIDCYETEVDKEEAEFVDNFGKECD-LFQEE

KAA0062445.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.4e-0636.17Show/hide
Query:  RKMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID
        +K TSF NSW+  TNPDLLE CCV+ Q+P     +S+  P  +    H        FN   V+G+ C    +       F+ ES+ S+SSE+++
Subjt:  RKMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID

TYK27438.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.7e-0636.56Show/hide
Query:  KMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID
        K TSF NSW+  TNPDLLE CCV+ Q+P     +S+  P  +    H        FN   V+G+ C    +       F+ ES+ S+SSE+++
Subjt:  KMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID

XP_038876689.1 uncharacterized protein LOC120069082 isoform X1 [Benincasa hispida]1.6e-0836.94Show/hide
Query:  KHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKR-------PVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCE
        + S+LLKPFP++F R+ +S + +WS L N +LLEDCC R Q+P   ++R       P  +T Q  +++      +  +V+G P     S    Q  +D  
Subjt:  KHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKR-------PVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCE

Query:  SIVSISSEDID
        SI S+SSED+D
Subjt:  SIVSISSEDID

XP_038887514.1 RNA-binding protein 39-like isoform X1 [Benincasa hispida]2.2e-1062.26Show/hide
Query:  KKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPVK
        KKHS LLKPFP HF+RK TSF NSW+ L N DLLE+CCV+ Q+P+    R V+
Subjt:  KKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPVK

TrEMBL top hitse value%identityAlignment
A0A0A0KHK4 Uncharacterized protein6.8e-0550Show/hide
Query:  KKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKR
        ++ S L K F +HF RK TSF NSW+ +TNPD+LE  CV+ Q+P     R
Subjt:  KKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKR

A0A5A7UV76 Uncharacterized protein1.2e-0935.76Show/hide
Query:  EKYIASPVLPATKKKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPV---KSTQQFHQSVFKIPRFNVQFVRG--VPCDNSN
        +K + S  +P   K++  L KPF + F RK TSF NSW+ +TNPDLLE+ CV+ Q+P     + V    S    + S       +V  VRG  +P D+  
Subjt:  EKYIASPVLPATKKKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPV---KSTQQFHQSVFKIPRFNVQFVRG--VPCDNSN

Query:  SPLSRQHGFDCESIVSISSEDIDCYETEVDKEEAEFVDNFGKECD-LFQEE
                   ES+VS+SSED++  E +  K   EF ++  K    LFQ E
Subjt:  SPLSRQHGFDCESIVSISSEDIDCYETEVDKEEAEFVDNFGKECD-LFQEE

A0A5A7V992 Putative mitochondrial protein1.6e-0636.17Show/hide
Query:  RKMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID
        +K TSF NSW+  TNPDLLE CCV+ Q+P     +S+  P  +    H        FN   V+G+ C    +       F+ ES+ S+SSE+++
Subjt:  RKMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID

A0A5D3DVC2 Putative mitochondrial protein2.8e-0636.56Show/hide
Query:  KMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID
        K TSF NSW+  TNPDLLE CCV+ Q+P     +S+  P  +    H        FN   V+G+ C    +       F+ ES+ S+SSE+++
Subjt:  KMTSFINSWSALTNPDLLEDCCVRAQLP----EASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSPLSRQHGFDCESIVSISSEDID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCCAACTAAAGCTTCTGCACTTCAGACTTTCGAAAAGTATATTGCATCCCCTGTTTTACCGGCGACAAAGAAAAAACACTCATATCTACTAAAACCTTTTCC
AAGACATTTTGTAAGGAAGATGACCTCCTTCATTAATTCTTGGTCTGCACTCACGAATCCTGATTTGCTGGAAGATTGTTGCGTTCGAGCCCAATTGCCGGAAGCTTCCT
CCAAACGGCCTGTTAAATCTACTCAACAGTTTCATCAGTCGGTCTTTAAAATTCCAAGGTTCAATGTGCAATTTGTTAGAGGTGTTCCATGTGACAATTCAAATTCTCCC
CTCTCTAGACAGCATGGCTTCGATTGCGAATCAATAGTGAGCATTAGTAGTGAAGACATTGATTGCTATGAGACAGAGGTAGATAAGGAAGAAGCAGAATTTGTGGACAA
CTTTGGCAAAGAATGCGATTTATTTCAGGAAGAAATCAACGCAGGAATTGGGAGCCAAGGAGCAATATGCAGAAACATCAACTTTGAGGGCTCTAATGATTTTGTACCGC
TCATCATGGAAGTTCTTCCGTCTAATCACAATAATGTTGCTGGTAGAGAAAGGAACCAAGGCAGTTGTGGGCTCTGCGATTGTTTGGCTCTCATTGATGTTGGGTGGTTG
ATCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCCAACTAAAGCTTCTGCACTTCAGACTTTCGAAAAGTATATTGCATCCCCTGTTTTACCGGCGACAAAGAAAAAACACTCATATCTACTAAAACCTTTTCC
AAGACATTTTGTAAGGAAGATGACCTCCTTCATTAATTCTTGGTCTGCACTCACGAATCCTGATTTGCTGGAAGATTGTTGCGTTCGAGCCCAATTGCCGGAAGCTTCCT
CCAAACGGCCTGTTAAATCTACTCAACAGTTTCATCAGTCGGTCTTTAAAATTCCAAGGTTCAATGTGCAATTTGTTAGAGGTGTTCCATGTGACAATTCAAATTCTCCC
CTCTCTAGACAGCATGGCTTCGATTGCGAATCAATAGTGAGCATTAGTAGTGAAGACATTGATTGCTATGAGACAGAGGTAGATAAGGAAGAAGCAGAATTTGTGGACAA
CTTTGGCAAAGAATGCGATTTATTTCAGGAAGAAATCAACGCAGGAATTGGGAGCCAAGGAGCAATATGCAGAAACATCAACTTTGAGGGCTCTAATGATTTTGTACCGC
TCATCATGGAAGTTCTTCCGTCTAATCACAATAATGTTGCTGGTAGAGAAAGGAACCAAGGCAGTTGTGGGCTCTGCGATTGTTTGGCTCTCATTGATGTTGGGTGGTTG
ATCAATTAA
Protein sequenceShow/hide protein sequence
MKSPTKASALQTFEKYIASPVLPATKKKHSYLLKPFPRHFVRKMTSFINSWSALTNPDLLEDCCVRAQLPEASSKRPVKSTQQFHQSVFKIPRFNVQFVRGVPCDNSNSP
LSRQHGFDCESIVSISSEDIDCYETEVDKEEAEFVDNFGKECDLFQEEINAGIGSQGAICRNINFEGSNDFVPLIMEVLPSNHNNVAGRERNQGSCGLCDCLALIDVGWL
IN