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HG10019508 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019508
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
Genome locationChr04:22631067..22635678
RNA-Seq ExpressionHG10019508
SyntenyHG10019508
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR016464 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141152.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis sativus]1.3e-4497.89Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_008465169.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo]4.6e-4598.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022152373.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Momordica charantia]1.1e-4395.79Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG LSKNLKELRILLCQ+SPSSAPARAFVEKNYKDLK+LNPKFPILIRECSGVEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_022935669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata]2.3e-4497.89Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

XP_038906356.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida]1.3e-4497.89Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPAR FVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

TrEMBL top hitse value%identityAlignment
A0A0A0LDA2 L51_S25_CI-B8 domain-containing protein6.4e-4597.89Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG+LSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A1S3CN67 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 22.2e-4598.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A5A7T2I6 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 22.2e-4598.95Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSG+EPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1F628 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1.1e-4497.89Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

A0A6J1J6D3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like5.4e-4496.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRGQLSKNLKELRILLCQ+SPSSAPARAFVEKNYK+LKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQI KALEDLVKVGAS
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

SwissProt top hitse value%identityAlignment
P0CB79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.7e-1852.94Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

P0CB80 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.7e-1852.94Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++K  AS
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Q02370 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 24.9e-1851.72Show/hide
Query:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        RG+L   L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  RGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q4R5E2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 21.9e-1752.5Show/hide
Query:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV
        L+E+RI LCQ SP S   R F+EK Y +LK  NP  PILIRECS V+P+LWARY  G E+   L   S  Q+++ALE+++
Subjt:  LKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLV

Q9FIJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 24.3e-3876.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS

Arabidopsis top hitse value%identityAlignment
AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative3.1e-3976.84Show/hide
Query:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS
        MAWRG +SK++KELRILLCQSSP+SAP R FVEKNYKDLK+LNPK PILIRECSGV+PQ+WARYDMG+ER   L+GL+E QI KALE+LVK GA+
Subjt:  MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAA
GGATCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTC
TGGAGGGCTTGAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGAATCTTGCTCTGCCAATCCTCTCCTTCAAGCGCCCCCGCTAGGGCATTTGTGGAAAAGAATTACAA
GGATCTCAAGACTTTGAATCCCAAATTTCCAATTTTGATCCGCGAATGCAGTGGAGTCGAGCCGCAATTATGGGCTAGATATGACATGGGCATTGAGAGGGTTGCTCGTC
TGGAGGGCTTGAGTGAGGCACAGATCTCGAAGGCGCTCGAAGACCTAGTTAAAGTTGGGGCATCCTGA
Protein sequenceShow/hide protein sequence
MAWRGQLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGVEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS