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HG10019532 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019532
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:22864307..22864750
RNA-Seq ExpressionHG10019532
SyntenyHG10019532
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057194.1 hypothetical protein E6C27_scaffold280G00230 [Cucumis melo var. makuwa]6.2e-2554.76Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED E+K R +++                  +SGQKLI D +KE     E +VEEEEK NSRR    ++A EK+KQ GR  +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
KGN59752.1 hypothetical protein Csa_001232 [Cucumis sativus]1.2e-2857.14Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED +++     +N+V               +SGQKLIGD + E     E DVEEEEKV+SR     ++AMEKRKQWGRT +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
TrEMBL top hitse value%identityAlignment
A0A0A0LG95 Uncharacterized protein5.9e-2957.14Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED +++     +N+V               +SGQKLIGD + E     E DVEEEEKV+SR     ++AMEKRKQWGRT +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
A0A5D3D5E0 Uncharacterized protein3.0e-2554.76Show/hide
Query:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV
        MGLDDWEL+DCHED E+K R +++                  +SGQKLI D +KE     E +VEEEEK NSRR    ++A EK+KQ GR  +CS GIAV
Subjt:  MGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICSVGIAV

Query:  AATICTVLLGSHSHRQGGASLVNKRH
        AATIC+VLLGSHSH  GG + VNKRH
Subjt:  AATICTVLLGSHSHRQGGASLVNKRH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGCAGCCGGCAGTTCCGAAAGGCTTCGAGTCGAGAAAAATGGGCCTCGACGATTGGGAACTCATTGATTGCCATGAAGATGACGAGAAAAAGCATCGCAGTGA
CGACCAGAACATCGTTTTCGCTCTAAACCATACCGATCAATCTATTGTTTCTGTTTCGAAAGTTTCCGGCCAGAAATTGATCGGCGACATGAGAAAGGAGTCGGGAACCG
CCGTGGAATTAGATGTGGAGGAGGAGGAAAAAGTAAATTCAAGAAGAATGAATATGGCGAATCTGGCGATGGAGAAGAGGAAACAATGGGGGAGAACGGCAATTTGTTCG
GTTGGAATTGCTGTGGCGGCTACGATTTGCACTGTGTTATTGGGAAGCCATAGCCACCGCCAAGGCGGAGCTTCGCTTGTGAATAAGCGCCATTCTTTGAAGGCTGAACC
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGCAGCCGGCAGTTCCGAAAGGCTTCGAGTCGAGAAAAATGGGCCTCGACGATTGGGAACTCATTGATTGCCATGAAGATGACGAGAAAAAGCATCGCAGTGA
CGACCAGAACATCGTTTTCGCTCTAAACCATACCGATCAATCTATTGTTTCTGTTTCGAAAGTTTCCGGCCAGAAATTGATCGGCGACATGAGAAAGGAGTCGGGAACCG
CCGTGGAATTAGATGTGGAGGAGGAGGAAAAAGTAAATTCAAGAAGAATGAATATGGCGAATCTGGCGATGGAGAAGAGGAAACAATGGGGGAGAACGGCAATTTGTTCG
GTTGGAATTGCTGTGGCGGCTACGATTTGCACTGTGTTATTGGGAAGCCATAGCCACCGCCAAGGCGGAGCTTCGCTTGTGAATAAGCGCCATTCTTTGAAGGCTGAACC
CTGA
Protein sequenceShow/hide protein sequence
MQQQPAVPKGFESRKMGLDDWELIDCHEDDEKKHRSDDQNIVFALNHTDQSIVSVSKVSGQKLIGDMRKESGTAVELDVEEEEKVNSRRMNMANLAMEKRKQWGRTAICS
VGIAVAATICTVLLGSHSHRQGGASLVNKRHSLKAEP