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HG10019533 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019533
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionmRNA cap-binding protein
Genome locationChr04:22869247..22872330
RNA-Seq ExpressionHG10019533
SyntenyHG10019533
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141135.1 eukaryotic translation initiation factor NCBP [Cucumis sativus]3.3e-2186.15Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF
        ME VGE RDFDSANDNNK NSAQ LLDSS+ PSLADDTNAKEAE+LSERIARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF

XP_008464961.1 PREDICTED: eukaryotic translation initiation factor NCBP [Cucumis melo]2.5e-2186.15Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF
        ME VGEKRDFDSANDNNK NSAQ LLDSS+ PSLADDTNAKEAE+ SERIARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF

XP_022930593.1 eukaryotic translation initiation factor NCBP [Cucurbita moschata]6.2e-2078.57Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF
        MELV EK+DFDSANDNNKLNSAQA+LDSSYPPS+A D      N+KEAEDLSER+ARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF

XP_038904119.1 eukaryotic translation initiation factor NCBP isoform X1 [Benincasa hispida]1.3e-2291.94Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLK
        MELVGEKRDFDSANDNNKLNSAQ L DSS+PPSL+DDTNAKEAEDLSER+ARDLKDGLHPLK
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLK

XP_038904120.1 eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida]2.1e-2389.23Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF
        MELVGEKRDFDSANDNNKLNSAQ L DSS+PPSL+DDTNAKEAEDLSER+ARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF

TrEMBL top hitse value%identityAlignment
A0A0A0LI71 Uncharacterized protein1.0e-2088.71Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLK
        ME VGE RDFDSANDNNK NSAQ LLDSS+ PSLADDTNAKEAE+LSERIARDLKDGLHPLK
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLK

A0A1S3CMT8 mRNA cap-binding protein1.2e-2186.15Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF
        ME VGEKRDFDSANDNNK NSAQ LLDSS+ PSLADDTNAKEAE+ SERIARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF

A0A5A7UUL0 mRNA cap-binding protein1.2e-2186.15Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF
        ME VGEKRDFDSANDNNK NSAQ LLDSS+ PSLADDTNAKEAE+ SERIARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRF

A0A6J1EVP3 mRNA cap-binding protein3.0e-2078.57Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF
        MELV EK+DFDSANDNNKLNSAQA+LDSSYPPS+A D      N+KEAEDLSER+ARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF

A0A6J1IS20 mRNA cap-binding protein3.0e-2078.57Show/hide
Query:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF
        MELV EK+DFDSANDNNKLNSAQA+LDSSYPPS+A D      N+KEAEDLSER+ARDLKDGLHPLK +F
Subjt:  MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADD-----TNAKEAEDLSERIARDLKDGLHPLKKRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGTAGGCGAGAAGAGGGATTTTGATTCTGCAAACGACAACAACAAGCTCAACTCTGCTCAAGCACTTCTCGATTCTTCTTATCCACCCTCGCTCGCTGATGA
CACAAATGCCAAAGAAGCTGAAGATTTAAGTGAACGCATAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGAAACGTTTTATTGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGTAGGCGAGAAGAGGGATTTTGATTCTGCAAACGACAACAACAAGCTCAACTCTGCTCAAGCACTTCTCGATTCTTCTTATCCACCCTCGCTCGCTGATGA
CACAAATGCCAAAGAAGCTGAAGATTTAAGTGAACGCATAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGAAACGTTTTATTGATGAGTGA
Protein sequenceShow/hide protein sequence
MELVGEKRDFDSANDNNKLNSAQALLDSSYPPSLADDTNAKEAEDLSERIARDLKDGLHPLKKRFIDE