; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019546 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019546
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr04:23037439..23038052
RNA-Seq ExpressionHG10019546
SyntenyHG10019546
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875107.1 nucleophosmin-like [Benincasa hispida]1.5e-0550.76Show/hide
Query:  MQNEVEIAEDKKA---QENDQQKQ---DNENVKVQDEEKDREGERDKDKEEE--ENVDEENRTKKENDK---KKRPKRQIKPTKKILENAKNPKNDKK--
        M  E++ A+D++A   QENDQQ Q   D E+ +   EEK +E    K   E+  +N   + R K  N+     KRPKRQ KPT KILENAK  K DKK  
Subjt:  MQNEVEIAEDKKA---QENDQQKQ---DNENVKVQDEEKDREGERDKDKEEE--ENVDEENRTKKENDK---KKRPKRQIKPTKKILENAKNPKNDKK--

Query:  ---VSPKVSPSKNTRHSPRWKDDAPSFDLKIS
           VS KVSPSK  R SPRW D APSFDLKIS
Subjt:  ---VSPKVSPSKNTRHSPRWKDDAPSFDLKIS

XP_038880505.1 glutamic acid-rich protein-like [Benincasa hispida]4.5e-1052.52Show/hide
Query:  MQNEVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKKENDKK-------------KRPKRQIKPTKKILENAKNPKN
        ++ EV+  +DK+A   QENDQQ+Q +++   +DEE+D+E E+DK+   ++NV E  +T K++ KK             KRPKRQ KPTKKILENAK  K 
Subjt:  MQNEVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKKENDKK-------------KRPKRQIKPTKKILENAKNPKN

Query:  DKK-----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL
        DKK     VS KVSPSK TR SP W D+APSFDLKISQL
Subjt:  DKK-----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL

XP_038885971.1 chromatin modification-related protein EAF7-like [Benincasa hispida]1.4e-1153.68Show/hide
Query:  EVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKKENDKK-------------KRPKRQIKPTKKILENAKNPKNDKK
        +V+ A+DKKA   QENDQQ+Q  ++   +DEE+D+E   +KDKE+   ++   +T K++ KK             KRPKRQ KPTKKILENAK  K DKK
Subjt:  EVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKKENDKK-------------KRPKRQIKPTKKILENAKNPKNDKK

Query:  -----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL
             VS KVS SK TRHSPRW DD PSFDLKISQL
Subjt:  -----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL

XP_038891747.1 pescadillo homolog [Benincasa hispida]3.1e-1155.47Show/hide
Query:  MQNEVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKK----------ENDK-KKRPKRQIKPTKKILENAKNPKNDK
        ++ EV  A+DK+A   QENDQQ+Q +++   +DEE+D+E E+DK+   ++NV E+   K           EN K  KRPKRQ KPTKKILENAK  K DK
Subjt:  MQNEVEIAEDKKA---QENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKK----------ENDK-KKRPKRQIKPTKKILENAKNPKNDK

Query:  K-----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL
        K     VS KVSPSK TR SPRW DDAPSFDLKISQL
Subjt:  K-----VSPKVSPSKNTRHSPRWKDDAPSFDLKISQL

XP_038896339.1 myb-like protein X [Benincasa hispida]1.1e-1657.34Show/hide
Query:  QNEVEIAEDKKAQENDQQKQDNENVKVQ-------DEEKDREGERDKDKEEEENVDEENRTK-----------KENDK---KKRPKRQIKPTKKILENAK
        +N+V+  ED +AQENDQQKQDNENV++Q       DEEKD+E + DKDKEEEE V E    K           K  D+   + RPKRQ + TKKILEN +
Subjt:  QNEVEIAEDKKAQENDQQKQDNENVKVQ-------DEEKDREGERDKDKEEEENVDEENRTK-----------KENDK---KKRPKRQIKPTKKILENAK

Query:  NPKNDK-----KVSPKVSPSKNTRHSPRWKDDAPSFDLKISQL
        N K DK     KVSPKVSPSK TRHSP WKDDAPSF++KISQL
Subjt:  NPKNDK-----KVSPKVSPSKNTRHSPRWKDDAPSFDLKISQL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATGAAGTTGAAATTGCGGAGGACAAGAAGGCTCAAGAAAATGACCAACAGAAGCAAGATAATGAAAATGTAAAAGTGCAAGATGAAGAGAAAGATCGAGAAGG
AGAAAGGGATAAAGATAAAGAAGAGGAAGAGAATGTAGATGAAGAAAATAGAACCAAAAAGGAGAATGATAAAAAGAAGAGGCCAAAGAGACAAATAAAACCAACCAAGA
AAATTCTGGAGAATGCAAAAAATCCAAAAAATGACAAAAAAGTGTCTCCAAAGGTTTCTCCAAGCAAAAATACAAGGCATTCTCCAAGGTGGAAGGATGACGCTCCAAGC
TTTGATCTCAAAATATCACAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATGAAGTTGAAATTGCGGAGGACAAGAAGGCTCAAGAAAATGACCAACAGAAGCAAGATAATGAAAATGTAAAAGTGCAAGATGAAGAGAAAGATCGAGAAGG
AGAAAGGGATAAAGATAAAGAAGAGGAAGAGAATGTAGATGAAGAAAATAGAACCAAAAAGGAGAATGATAAAAAGAAGAGGCCAAAGAGACAAATAAAACCAACCAAGA
AAATTCTGGAGAATGCAAAAAATCCAAAAAATGACAAAAAAGTGTCTCCAAAGGTTTCTCCAAGCAAAAATACAAGGCATTCTCCAAGGTGGAAGGATGACGCTCCAAGC
TTTGATCTCAAAATATCACAACTTTGA
Protein sequenceShow/hide protein sequence
MQNEVEIAEDKKAQENDQQKQDNENVKVQDEEKDREGERDKDKEEEENVDEENRTKKENDKKKRPKRQIKPTKKILENAKNPKNDKKVSPKVSPSKNTRHSPRWKDDAPS
FDLKISQL