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HG10019561 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019561
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationChr04:23193062..23193373
RNA-Seq ExpressionHG10019561
SyntenyHG10019561
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065480.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]2.4e-0746.77Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE
        Q NG  I QLRK  V + Q +L +E Y+ K+KT+WQ+L ++R  NDCTCG  +    H +SE
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE

KZV26178.1 hypothetical protein F511_06345 [Dorcoceras hygrometricum]6.5e-0544.62Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        Q NG  I QLR+ L+N++QE L +  YF K+K LW +L+ FR       CTCG  + LT+H   E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

KZV54315.1 hypothetical protein F511_34689 [Dorcoceras hygrometricum]3.8e-0544.62Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        Q NG  I QLR+ L+N++QE L +  YF K+K LW +L+ FR       CTCG  + LT+H   E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

XP_016199461.1 uncharacterized protein LOC107640454 [Arachis ipaensis]6.5e-0541.94Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE
        Q NG  I +L+K LV ++Q +L +  YF K+KT+W++   FR +  CTCG  ++  SH D E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE

XP_030505437.1 uncharacterized protein LOC115720427 [Cannabis sativa]5.0e-0544.62Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        Q NG  I  LRK L+N+ QE+L +  YF K+KT+W++LA +R     N CTCG  + L  H   E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

TrEMBL top hitse value%identityAlignment
A0A2Z7AXW3 Uncharacterized protein3.2e-0544.62Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        Q NG  I QLR+ L+N++QE L +  YF K+K LW +L+ FR       CTCG  + LT+H   E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

A0A2Z7BAC6 DNA glycosylase4.1e-0543.94Show/hide
Query:  LQMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        LQ NG+ I QLR+ L+N+  E L +  YF K+K LW +L+ FR       CTCG  + LT+H   E
Subjt:  LQMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

A0A2Z7D4G6 Uncharacterized protein1.9e-0544.62Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE
        Q NG  I QLR+ L+N++QE L +  YF K+K LW +L+ FR       CTCG  + LT+H   E
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFR---LINDCTCGSTESLTSHTDSE

A0A392M266 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)4.1e-0544.44Show/hide
Query:  LQMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE
        LQ NG  + QLRK  +  +Q +L + AY+ KIK LW++LA+FR I+ C CG    L  H + E
Subjt:  LQMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE

A0A5A7VE66 Cysteine-rich RLK (Receptor-like protein kinase) 81.2e-0746.77Show/hide
Query:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE
        Q NG  I QLRK  V + Q +L +E Y+ K+KT+WQ+L ++R  NDCTCG  +    H +SE
Subjt:  QMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTGTCACTTCATGGATCATCAACTCGATCTCCAAATAGATTGTTGGTAAACTTGTGTACATTGATTCTGCTAAGGATGTACGGGATGATCTTGAAGAATGTTTC
AGTCTTCGACCTTCAAATGAATGGAACAATGATTAATCAATTAAGGAAGCGATTGGTTAATGTATCTCAAGAATCTTTGATAATGGAAGCCTATTTCATAAAAATCAAGA
CCTTATGGCAAGATCTCGCTAAATTTAGATTGATCAATGATTGTACATGTGGCAGTACTGAATCACTGACTTCTCATACTGATTCAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTTGTCACTTCATGGATCATCAACTCGATCTCCAAATAGATTGTTGGTAAACTTGTGTACATTGATTCTGCTAAGGATGTACGGGATGATCTTGAAGAATGTTTC
AGTCTTCGACCTTCAAATGAATGGAACAATGATTAATCAATTAAGGAAGCGATTGGTTAATGTATCTCAAGAATCTTTGATAATGGAAGCCTATTTCATAAAAATCAAGA
CCTTATGGCAAGATCTCGCTAAATTTAGATTGATCAATGATTGTACATGTGGCAGTACTGAATCACTGACTTCTCATACTGATTCAGAATAG
Protein sequenceShow/hide protein sequence
MMLSLHGSSTRSPNRLLVNLCTLILLRMYGMILKNVSVFDLQMNGTMINQLRKRLVNVSQESLIMEAYFIKIKTLWQDLAKFRLINDCTCGSTESLTSHTDSE