; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10019579 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10019579
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationChr04:23390126..23392707
RNA-Seq ExpressionHG10019579
SyntenyHG10019579
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-20295.37Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGGYDGAGSAPSGRYHPYGR

KGN59707.1 hypothetical protein Csa_002190 [Cucumis sativus]7.4e-20396.87Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSGAYGD YGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYAGSYDMG+GTGY AGGRGSFYGSR GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]4.8e-20295.13Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]6.2e-20295.36Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]2.8e-20295.62Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein3.6e-20396.87Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSGAYGD YGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR
        ASFSRGYDFRGGYGGPDESYGAYNSGGAP+TGGYAGSYDMG+GTGY AGGRGSFYGSR GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-GGGGGGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 11.8e-19996.34Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHD+AKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GD YGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY AGGRGSFYGSR  GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 11.8e-19996.34Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKPND ATNGEHD+AKPLNHKDDGSRHDPP HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSGAY GD YGEFGGGGYGG FRAGGPYGARGGGYGGYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAY-GDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYA SYDMG+GTGY AGGRGSFYGSR  GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 12.3e-20295.13Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 13.0e-20295.36Show/hide
Query:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK NDAATNGEH++AKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM
        DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEM

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGD YGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYDFRGGYGGPDESYGAYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR      GGGGGGGYDGAGSAPSGRYHPYGR
Subjt:  ASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR------GGGGGGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A11.2e-3037.13Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF  +G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGY---
          +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD ++       + G   E++KA  K+     + S+R      ++ G  G G+   
Subjt:  SVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGAYGDGY---

Query:  ------GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG
              G F G G  GG R GG YG  G GY G+ GND    G YG GG G        G S  YG S  +GY  +G GYGG   SY +YN+GG    GG
Subjt:  ------GEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRG-GYGGPDESYGAYNSGGAPNTGG

Query:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSG
         +GS   G G+    G   +   + G   GG + G  S P G
Subjt:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSG

P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog6.0e-3037.07Show/hide
Query:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK
        HG+     K+F+GGL   TT     +HF  +GEI D V+MKD KT   RGFGF+TY+   +VD       H ++G+ VE KR +P+      +     KK
Subjt:  HGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DTHIINGKQVEIKRTIPKGSSSSRD--FKTKK

Query:  IFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGA
        +FVGGI   ++E++ RD+F QYG V    I+ D  T + RGF F+ F+    VD +  + N  ++ G  +++KKA PK      AP  R    R    G 
Subjt:  IFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGA

Query:  YGDGYGEFGGGGYGGGFRAGGPYGARGGG----YGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNT
         G G+G  GG G  GG   GG  G  GG      G  GG D  G G  G GG   +     MG   RYG    R     GG+     S   YNSG  P +
Subjt:  YGDGYGEFGGGGYGGGFRAGGPYGARGGG----YGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNT

Query:  GGYAGSYDMGIGTGYPAGGRG---------SFYGSRGGGGGGGYDGAG
         G+ G Y    G G   G  G         S  GSRGGGGGG   G G
Subjt:  GGYAGSYDMGIGTGYPAGGRG---------SFYGSRGGGGGGGYDGAG

P51968 Heterogeneous nuclear ribonucleoprotein A3 homolog 13.0e-2934.69Show/hide
Query:  DGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGSSS-
        D   HDP    +     K+F+GGL  ETT     +HF  +G++TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S+ 
Subjt:  DGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDTHIINGKQVEIKRTIPKGSSS-

Query:  -SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSK---
               KKIFVGGI    +E   RD+   YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     +  +   
Subjt:  -SRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSK---

Query:  ----RYHDSRPSYSGAYGDGYGEFGGGGY-------GGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTG-GIGAYREDPSMGYSARYGASFSRGYDFRG
             +     +Y G  G  +G  GGGG+       GGG R GG YG  G GY G+GG+     G YG G G G      S GY  + G     G    G
Subjt:  ----RYHDSRPSYSGAYGDGYGEFGGGGY-------GGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTG-GIGAYREDPSMGYSARYGASFSRGYDFRG

Query:  GYGGPDESYGAYNSGGAPNTGGYAGSYDMGIG-------TGYPAGGRGS-----FYGSRGGGGGGGYDG
        GY G +ES G +  G   + G Y G      G       +G  +GG GS      YGS GGGGGGG  G
Subjt:  GYGGPDESYGAYNSGGAPNTGGYAGSYDMGIG-------TGYPAGGRGS-----FYGSRGGGGGGGYDG

P51991 Heterogeneous nuclear ribonucleoprotein A32.3e-2937.04Show/hide
Query:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD
        HDP    +     K+F+GGL  ETT     +HF  +G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S      
Subjt:  HDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDTHIINGKQVEIKRTIPKGSS--SSRD

Query:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP
           KKIFVGGI    +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R 
Subjt:  FKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSRP

Query:  SYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN
          SG +    G FGGG  GG F  GG +G R GGYGG GG     YG    GG G Y  +   G    YG     GY  RGGYGG    YG  N G    
Subjt:  SYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN

Query:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYG
         GGY G      G GY     G  +G    GGGG Y+  G+    +   YG
Subjt:  TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYG

Q8W034 Heterogeneous nuclear ribonucleoprotein 11.8e-3937.66Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+G   +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY
             GYG P    GA +S     G AP T             GGY+GS D G G         G P+GG  +  GS GG  GGGY G GS  S     Y
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.3e-5241.21Show/hide
Query:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG
        +S GK+FVGG+  ETT+  F  +FG +GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      KT+KIFVG
Subjt:  ASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGSSSS---RDFKTKKIFVG

Query:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA
        G+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E+   QVEIK+AEPK+     +     +   +D   SYSG 
Subjt:  GIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA----PSKRYHDSRPSYSGA

Query:  YGDGYGEFGG-GGYGGGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGG
          + Y  + G GGY              GGYG Y GN   +  G YG GG                      GY +  GYGG   + G Y +GG  + G 
Subjt:  YGDGYGEFGG-GGYGGGFRAGGPYGARGGGYGGYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPNTGG

Query:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY
            Y +     Y  GG+    G+ G   G G    GS P  RYHPY
Subjt:  YAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-6967.78Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.3e-8454.55Show/hide
Query:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F KHFG YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIEDTH+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN ++MA +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGAYGDGYGEFGG--GGYG---GGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES
         S + +Y    G +GG  GGYG   G  R+ GGP     GGYG   G  G +F  GY  YG G +G YR +P +GYS+R+G  +  G+   G   G + +
Subjt:  PSYSGAYGDGYGEFGG--GGYG---GGFRA-GGPYGARGGGYG---GYGGNDF-SGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDES

Query:  YGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR
        Y  Y  GG    GGY G    G G  Y +GG G  Y   GG  G GY     + S RYHPY R
Subjt:  YGAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-4037.66Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF +YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +++G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------AYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD
           + Y  +  SY G           + G+G   +G  GYG G+   G  GA  G YGGY G+   GYG   T G GA    P  GY +  G +    +D
Subjt:  APSKRYHDSRPSYSG-----------AYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYD

Query:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY
             GYG P    GA +S     G AP T             GGY+GS D G G         G P+GG  +  GS GG  GGGY G GS  S     Y
Subjt:  --FRGGYGGPDESYGAYNS-----GGAPNT-------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPY

Query:  G
        G
Subjt:  G

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-10860Show/hide
Query:  HDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIK
        HD     + +DD  +  P S G   SAGKIFVGGL RETTSA+F+KHFG YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI+D HII GKQVEIK
Subjt:  HDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIK

Query:  RTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPP
        RTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E++G+QVEIKKAEPKK N  
Subjt:  RTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPP

Query:  PAPSKRYHDSRPSYSGAYGDGYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY---GASFSR-GYDF
          PSKR+ DSR ++ G YGDGYG   GGGY   GG +++GG Y G R GGYGGYGG +F GYG  G  GG+G YR +P++GYS RY   G  ++R GY  
Subjt:  PAPSKRYHDSRPSYSGAYGDGYGEFGGGGY---GGGFRAGGPY-GARGGGYGGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY---GASFSR-GYDF

Query:  ---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDMGIGTGYPAGGRGSFYGSRGG----GGGGGYDGAGSA
                              GGYGGP  SY         G Y  G G    GGY   G YDMG   G  AGG G+  G  GG    GGGGG  G G  
Subjt:  ---------------------RGGYGGPDESY---------GAYNSG-GAPNTGGY--AGSYDMGIGTGYPAGGRGSFYGSRGG----GGGGGYDGAGSA

Query:  PSGRYHPYGR
         SGRYHPYGR
Subjt:  PSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGATGCTGCCACTAATGGTGAACATGACGAAGCCAAGCCCTTGAACCATAAAGACGATGGGAGTAGACATGACCCTCC
ATCTCATGGCGACGGAGCCAGTGCTGGGAAAATCTTTGTTGGAGGTTTACCGCGCGAAACGACTTCTGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGATCTTCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGA
AGACGAGTTCAGGGATTTTTTTATGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGGGACCACTCCACCAGTCGATCTCGTGGGTTTGGTTTTATTACATTTGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAAATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCC
CCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGCCTATGGGGATGGATATGGGGAGTTTGGAGGGGGTGGGTATGGTGGTGGTTTTAGGGCAGGTGGACC
ATATGGCGCTAGAGGTGGTGGATATGGTGGATATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACCGGGAAGACCCCTCTATGG
GGTACTCTGCTCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCCGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAAT
ACTGGTGGGTATGCAGGTAGCTATGATATGGGCATTGGCACTGGATACCCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGAGGATATGA
TGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAAAACTCCATGGATTCCAAGCCAAATGATGCTGCCACTAATGGTGAACATGACGAAGCCAAGCCCTTGAACCATAAAGACGATGGGAGTAGACATGACCCTCC
ATCTCATGGCGACGGAGCCAGTGCTGGGAAAATCTTTGTTGGAGGTTTACCGCGCGAAACGACTTCTGCACAATTTGTTAAACATTTTGGTGACTATGGGGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACACACATATTATT
AATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGATCTTCCAGCTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGA
AGACGAGTTCAGGGATTTTTTTATGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGGGACCACTCCACCAGTCGATCTCGTGGGTTTGGTTTTATTACATTTGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGATGGCAGGCAGTCAGGTGGAAATCAAGAAGGCGGAGCCAAAAAAAGCAAATCCACCTCCAGCC
CCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGCCTATGGGGATGGATATGGGGAGTTTGGAGGGGGTGGGTATGGTGGTGGTTTTAGGGCAGGTGGACC
ATATGGCGCTAGAGGTGGTGGATATGGTGGATATGGTGGAAATGATTTTAGTGGTTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACCGGGAAGACCCCTCTATGG
GGTACTCTGCTCGTTATGGAGCAAGCTTCAGTAGAGGTTATGATTTTAGAGGTGGTTATGGTGGACCCGATGAGAGTTATGGTGCGTATAACAGCGGTGGTGCTCCTAAT
ACTGGTGGGTATGCAGGTAGCTATGATATGGGCATTGGCACTGGATACCCTGCTGGTGGTAGAGGCTCCTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGAGGATATGA
TGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGGTAG
Protein sequenceShow/hide protein sequence
MSENSMDSKPNDAATNGEHDEAKPLNHKDDGSRHDPPSHGDGASAGKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKAEPKKANPPPA
PSKRYHDSRPSYSGAYGDGYGEFGGGGYGGGFRAGGPYGARGGGYGGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAPN
TGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGGYDGAGSAPSGRYHPYGR